Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL589880.1-201ENST00000448271 287 ntBASIC2.64□□□□□ -1.99
TPM3P06753 AC233279.1-201ENST00000455300 423 ntBASIC2.64□□□□□ -1.99
TPM3P06753 PABPC1P3-201ENST00000469174 459 ntBASIC2.64□□□□□ -1.99
TPM3P06753 AC090255.1-201ENST00000495779 349 ntBASIC2.64□□□□□ -1.99
TPM3P06753 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.64□□□□□ -1.99
TPM3P06753 CAB39P1-201ENST00000502277 460 ntBASIC2.64□□□□□ -1.99
TPM3P06753 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.64□□□□□ -1.99
TPM3P06753 RNU6-1095P-201ENST00000516148 108 ntBASIC2.64□□□□□ -1.99
TPM3P06753 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.64□□□□□ -1.99
TPM3P06753 AC010546.1-201ENST00000569391 485 ntBASIC2.64□□□□□ -1.99
TPM3P06753 AC011260.1-201ENST00000578420 472 ntBASIC2.64□□□□□ -1.99
TPM3P06753 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.64□□□□□ -1.99
TPM3P06753 VN1R88P-201ENST00000596787 292 ntBASIC2.64□□□□□ -1.99
TPM3P06753 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TPM3P06753 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.64□□□□□ -1.99
TPM3P06753 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.64□□□□□ -1.99
TPM3P06753 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.64□□□□□ -1.99
TPM3P06753 ZNF663P-202ENST00000641770 1131 ntBASIC2.64□□□□□ -1.99
TPM3P06753 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TPM3P06753 AC009902.3-201ENST00000606235 2172 ntBASIC2.64□□□□□ -1.99
TPM3P06753 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TPM3P06753 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.64□□□□□ -1.99
TPM3P06753 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM3P06753 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TPM3P06753 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
TPM3P06753 RNU6-461P-201ENST00000364195 107 ntBASIC2.63□□□□□ -1.99
TPM3P06753 RNU6-198P-201ENST00000384258 104 ntBASIC2.63□□□□□ -1.99
TPM3P06753 RPS26P30-201ENST00000443431 335 ntBASIC2.63□□□□□ -1.99
TPM3P06753 AP000936.2-201ENST00000447151 681 ntBASIC2.63□□□□□ -1.99
TPM3P06753 TRBV26-201ENST00000456572 344 ntBASIC2.63□□□□□ -1.99
TPM3P06753 AC092798.1-201ENST00000458542 409 ntBASIC2.63□□□□□ -1.99
TPM3P06753 snoU109.4-201ENST00000458953 143 ntBASIC2.63□□□□□ -1.99
TPM3P06753 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.63□□□□□ -1.99
TPM3P06753 RPS27P26-201ENST00000494583 239 ntBASIC2.63□□□□□ -1.99
TPM3P06753 AC104108.1-201ENST00000509930 412 ntBASIC2.63□□□□□ -1.99
TPM3P06753 XKRY-201ENST00000510392 1100 ntBASIC2.63□□□□□ -1.99
TPM3P06753 AC034159.1-201ENST00000513885 583 ntBASIC2.63□□□□□ -1.99
TPM3P06753 SETP12-201ENST00000514068 805 ntBASIC2.63□□□□□ -1.99
TPM3P06753 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.63□□□□□ -1.99
TPM3P06753 OR4P1P-201ENST00000530808 1136 ntBASIC2.63□□□□□ -1.99
TPM3P06753 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM3P06753 MIR4429-201ENST00000580105 73 ntBASIC2.63□□□□□ -1.99
TPM3P06753 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM3P06753 AC012443.1-201ENST00000605605 231 ntBASIC2.63□□□□□ -1.99
TPM3P06753 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TPM3P06753 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
TPM3P06753 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.63□□□□□ -1.99
TPM3P06753 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.62□□□□□ -1.99
TPM3P06753 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TPM3P06753 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.62□□□□□ -1.99
TPM3P06753 RNA5SP27-201ENST00000363839 119 ntBASIC2.62□□□□□ -1.99
TPM3P06753 AL513475.1-201ENST00000406602 315 ntBASIC2.62□□□□□ -1.99
TPM3P06753 AC234781.2-201ENST00000426370 994 ntBASIC2.62□□□□□ -1.99
TPM3P06753 AL365496.1-201ENST00000426885 215 ntBASIC2.62□□□□□ -1.99
TPM3P06753 AC012497.1-201ENST00000429392 575 ntBASIC2.62□□□□□ -1.99
TPM3P06753 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM3P06753 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM3P06753 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.62□□□□□ -1.99
TPM3P06753 PNPLA4P1-201ENST00000458328 305 ntBASIC2.62□□□□□ -1.99
TPM3P06753 SNORD109B-201ENST00000458961 67 ntBASIC2.62□□□□□ -1.99
TPM3P06753 SNORD109A-201ENST00000459128 67 ntBASIC2.62□□□□□ -1.99
TPM3P06753 RPL36AP51-201ENST00000487216 318 ntBASIC2.62□□□□□ -1.99
TPM3P06753 LINC00888-204ENST00000487386 421 ntBASIC2.62□□□□□ -1.99
TPM3P06753 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM3P06753 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.62□□□□□ -1.99
TPM3P06753 CASP1P1-201ENST00000526345 212 ntBASIC2.62□□□□□ -1.99
TPM3P06753 AC113192.3-201ENST00000529152 742 ntBASIC2.62□□□□□ -1.99
TPM3P06753 AC068339.2-201ENST00000534395 618 ntBASIC2.62□□□□□ -1.99
TPM3P06753 LSM6P2-201ENST00000552208 177 ntBASIC2.62□□□□□ -1.99
TPM3P06753 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.62□□□□□ -1.99
TPM3P06753 TRAV28-201ENST00000557548 323 ntBASIC2.62□□□□□ -1.99
TPM3P06753 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.62□□□□□ -1.99
TPM3P06753 AC112503.2-201ENST00000609005 552 ntBASIC2.62□□□□□ -1.99
TPM3P06753 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
TPM3P06753 AC004944.1-201ENST00000517807 3059 ntBASIC2.62□□□□□ -1.99
TPM3P06753 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TPM3P06753 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TPM3P06753 AC016717.2-201ENST00000609089 5141 ntBASIC2.61□□□□□ -1.99
TPM3P06753 RPL27AP8-201ENST00000424277 446 ntBASIC2.61□□□□□ -1.99
TPM3P06753 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM3P06753 AC009414.1-201ENST00000427200 443 ntBASIC2.61□□□□□ -1.99
TPM3P06753 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.61□□□□□ -1.99
TPM3P06753 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM3P06753 AL358232.1-201ENST00000448030 501 ntBASIC2.61□□□□□ -1.99
TPM3P06753 AC078857.1-201ENST00000469870 667 ntBASIC2.61□□□□□ -1.99
TPM3P06753 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TPM3P06753 GZMAP1-201ENST00000503054 631 ntBASIC2.61□□□□□ -1.99
TPM3P06753 KLRA1P-201ENST00000503499 986 ntBASIC2.61□□□□□ -1.99
TPM3P06753 COX6CP8-201ENST00000522620 226 ntBASIC2.61□□□□□ -1.99
TPM3P06753 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.61□□□□□ -1.99
TPM3P06753 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM3P06753 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.61□□□□□ -1.99
TPM3P06753 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.61□□□□□ -1.99
TPM3P06753 SNORD53-201ENST00000579969 78 ntBASIC2.61□□□□□ -1.99
TPM3P06753 MIR3944-201ENST00000581277 108 ntBASIC2.61□□□□□ -1.99
TPM3P06753 MIR5195-201ENST00000583555 115 ntBASIC2.61□□□□□ -1.99
TPM3P06753 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.61□□□□□ -1.99
TPM3P06753 BX322635.1-201ENST00000605804 496 ntBASIC2.61□□□□□ -1.99
TPM3P06753 AP002826.1-201ENST00000608835 315 ntBASIC2.61□□□□□ -1.99
TPM3P06753 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms