Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RPS15AP1-201ENST00000457423 391 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 NF1P3-201ENST00000457709 450 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 RNU6-717P-201ENST00000459076 104 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 MTCO2P32-201ENST00000514865 403 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 RN7SKP96-201ENST00000516948 297 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.34□□□□□ -2.03
COL1A1P02452 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
COL1A1P02452 MIR4255-201ENST00000579351 72 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 MIR3683-201ENST00000580847 82 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 AC245128.3-201ENST00000594721 748 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 AC069304.3-201ENST00000603938 1084 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 AC113194.1-201ENST00000606037 500 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
COL1A1P02452 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.34□□□□□ -2.03
COL1A1P02452 MIR4496-201ENST00000635896 61 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL1A1P02452 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL1A1P02452 AC241520.1-201ENST00000422654 1099 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 MTND2P8-201ENST00000450555 1025 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.33□□□□□ -2.04
COL1A1P02452 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.33□□□□□ -2.04
COL1A1P02452 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.33□□□□□ -2.04
COL1A1P02452 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.33□□□□□ -2.04
COL1A1P02452 SNORA31.15-201ENST00000516771 132 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.33□□□□□ -2.04
COL1A1P02452 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
COL1A1P02452 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.33□□□□□ -2.04
COL1A1P02452 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.33□□□□□ -2.04
COL1A1P02452 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.33□□□□□ -2.04
COL1A1P02452 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.33□□□□□ -2.04
COL1A1P02452 AC015726.3-201ENST00000624501 418 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.33□□□□□ -2.04
COL1A1P02452 API5P2-201ENST00000397055 1498 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.33□□□□□ -2.04
COL1A1P02452 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
COL1A1P02452 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
COL1A1P02452 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
COL1A1P02452 RNU1-101P-201ENST00000391171 127 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 AL445685.2-201ENST00000422551 342 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.33□□□□□ -2.04
COL1A1P02452 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.33□□□□□ -2.04
COL1A1P02452 AC068781.1-201ENST00000488231 618 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.33□□□□□ -2.04
COL1A1P02452 AC005840.1-201ENST00000498412 377 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 AC108078.2-201ENST00000510750 236 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 SNORA31.26-201ENST00000517250 137 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
COL1A1P02452 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.33□□□□□ -2.04
COL1A1P02452 AC090616.5-202ENST00000582111 297 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL1A1P02452 RPP40P2-201ENST00000603596 712 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 AL356280.1-201ENST00000603614 379 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 AC009314.1-201ENST00000603871 304 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 AL359821.1-201ENST00000605519 182 ntBASIC2.33□□□□□ -2.04
COL1A1P02452 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL1A1P02452 MIR378A-201ENST00000362177 66 ntBASIC2.32□□□□□ -2.04
COL1A1P02452 DNAJC19P6-201ENST00000401853 280 ntBASIC2.32□□□□□ -2.04
COL1A1P02452 RNU2-20P-201ENST00000410425 191 ntBASIC2.32□□□□□ -2.04
COL1A1P02452 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL1A1P02452 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.32□□□□□ -2.04
COL1A1P02452 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.32□□□□□ -2.04
COL1A1P02452 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.32□□□□□ -2.04
COL1A1P02452 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.32□□□□□ -2.04
COL1A1P02452 AL157827.1-201ENST00000447622 132 ntBASIC2.32□□□□□ -2.04
COL1A1P02452 AC093392.2-201ENST00000450682 337 ntBASIC2.32□□□□□ -2.04
COL1A1P02452 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.32□□□□□ -2.04
COL1A1P02452 RNA5SP480-201ENST00000516840 109 ntBASIC2.32□□□□□ -2.04
COL1A1P02452 snoZ278.1-201ENST00000517059 112 ntBASIC2.32□□□□□ -2.04
COL1A1P02452 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.32□□□□□ -2.04
COL1A1P02452 SNRPGP15-201ENST00000600149 222 ntBASIC2.32□□□□□ -2.04
COL1A1P02452 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.32□□□□□ -2.04
COL1A1P02452 MTCO1P6-201ENST00000481192 1384 ntBASIC2.32□□□□□ -2.04
COL1A1P02452 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.31□□□□□ -2.04
COL1A1P02452 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.31□□□□□ -2.04
COL1A1P02452 AL139276.1-201ENST00000311910 1001 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 CKS1BP5-201ENST00000434172 273 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC2.31□□□□□ -2.04
COL1A1P02452 RPL17P49-201ENST00000443728 411 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 OR6C72P-201ENST00000451403 892 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.31□□□□□ -2.04
COL1A1P02452 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.31□□□□□ -2.04
COL1A1P02452 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 AF279873.1-201ENST00000523393 313 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.31□□□□□ -2.04
COL1A1P02452 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.31□□□□□ -2.04
COL1A1P02452 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.31□□□□□ -2.04
COL1A1P02452 AL109653.1-201ENST00000603091 248 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.31□□□□□ -2.04
COL1A1P02452 AC011890.2-201ENST00000613393 294 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 AP000553.5-201ENST00000641933 54 ntBASIC2.31□□□□□ -2.04
COL1A1P02452 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
COL1A1P02452 AC103988.1-201ENST00000566382 2177 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 METTL21EP-201ENST00000298105 713 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 HNRNPDP2-201ENST00000406475 478 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms