Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAMP4O75379 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.22□□□□□ -1.57
VAMP4O75379 LINC01109-201ENST00000603837 3081 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
VAMP4O75379 RNA5SP258-201ENST00000362750 119 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 RNU6-359P-201ENST00000365466 108 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 Y_RNA.548-201ENST00000384656 105 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 RPL7P60-201ENST00000397636 735 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 RPL31P52-201ENST00000407532 367 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 AC108032.1-201ENST00000416706 207 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 RPS11P1-201ENST00000451072 473 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 AC093853.1-201ENST00000515689 483 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 IFITM8P-201ENST00000522529 394 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.22□□□□□ -1.57
VAMP4O75379 AP000907.2-201ENST00000530827 353 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.22□□□□□ -1.57
VAMP4O75379 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.22□□□□□ -1.57
VAMP4O75379 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.22□□□□□ -1.57
VAMP4O75379 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 MIR4512-201ENST00000583257 77 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 VN1R80P-201ENST00000597126 338 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.22□□□□□ -1.57
VAMP4O75379 MIR6868-201ENST00000611215 58 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 AL356585.4-201ENST00000623078 1229 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.22□□□□□ -1.57
VAMP4O75379 AC068724.3-201ENST00000625906 87 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
VAMP4O75379 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VAMP4O75379 AL122126.1-201ENST00000546905 1318 ntBASIC5.22□□□□□ -1.57
VAMP4O75379 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.57
VAMP4O75379 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.21□□□□□ -1.57
VAMP4O75379 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VAMP4O75379 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.21□□□□□ -1.57
VAMP4O75379 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VAMP4O75379 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAMP4O75379 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VAMP4O75379 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.21□□□□□ -1.58
VAMP4O75379 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.21□□□□□ -1.58
VAMP4O75379 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
VAMP4O75379 RNU6-1207P-201ENST00000384343 107 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 AC068050.1-201ENST00000394891 380 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 AL356057.2-201ENST00000403318 432 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.21□□□□□ -1.58
VAMP4O75379 EIF4EP1-201ENST00000422311 642 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.21□□□□□ -1.58
VAMP4O75379 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.21□□□□□ -1.58
VAMP4O75379 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.21□□□□□ -1.58
VAMP4O75379 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAMP4O75379 AC079781.2-201ENST00000446424 169 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 snoU13.8-201ENST00000458890 104 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 AC055855.1-201ENST00000489563 579 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 MTCO3P9-201ENST00000506989 781 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 AC017037.1-201ENST00000508460 471 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.21□□□□□ -1.58
VAMP4O75379 Y_RNA.701-201ENST00000516812 110 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 SNORD60.2-201ENST00000516883 86 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.21□□□□□ -1.58
VAMP4O75379 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.21□□□□□ -1.58
VAMP4O75379 AL442663.2-201ENST00000554385 511 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 OR4T1P-201ENST00000554933 911 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAMP4O75379 AC022968.1-201ENST00000567372 442 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 AC115621.1-201ENST00000604653 858 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 AC023043.4-201ENST00000612081 449 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 SNX18P1Y-201ENST00000616231 511 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 AC126177.8-201ENST00000618339 1015 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 FRG1KP-201ENST00000623592 341 ntBASIC5.21□□□□□ -1.58
VAMP4O75379 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.21□□□□□ -1.58
VAMP4O75379 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.21□□□□□ -1.58
VAMP4O75379 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAMP4O75379 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VAMP4O75379 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VAMP4O75379 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.21□□□□□ -1.58
VAMP4O75379 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.2□□□□□ -1.58
VAMP4O75379 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.2□□□□□ -1.58
VAMP4O75379 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP4O75379 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.2□□□□□ -1.58
VAMP4O75379 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.2□□□□□ -1.58
VAMP4O75379 Y_RNA.381-201ENST00000365666 102 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VAMP4O75379 ELOCP4-201ENST00000420090 333 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 PSMA6P3-201ENST00000428242 164 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.2□□□□□ -1.58
VAMP4O75379 AC093156.1-201ENST00000440382 670 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.2□□□□□ -1.58
VAMP4O75379 HMGB3P21-201ENST00000452483 547 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 RPL23AP2-201ENST00000471227 466 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.2□□□□□ -1.58
VAMP4O75379 PCBP2P3-201ENST00000509726 843 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.2□□□□□ -1.58
VAMP4O75379 RNA5SP401-201ENST00000515920 127 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 SNORD116-26-201ENST00000516006 96 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms