Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC007742.2-201ENST00000618226 398 ntBASIC4.19□□□□□ -1.74
PROM1O43490 AC093648.1-201ENST00000623546 606 ntBASIC4.19□□□□□ -1.74
PROM1O43490 AC007546.2-201ENST00000623996 360 ntBASIC4.19□□□□□ -1.74
PROM1O43490 AC024614.3-201ENST00000637860 256 ntBASIC4.19□□□□□ -1.74
PROM1O43490 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PROM1O43490 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.19□□□□□ -1.74
PROM1O43490 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.19□□□□□ -1.74
PROM1O43490 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PROM1O43490 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PROM1O43490 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
PROM1O43490 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.18□□□□□ -1.74
PROM1O43490 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PROM1O43490 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 RNA5SP258-201ENST00000362750 119 ntBASIC4.18□□□□□ -1.74
PROM1O43490 RNU6-1120P-201ENST00000362988 108 ntBASIC4.18□□□□□ -1.74
PROM1O43490 RNY3P3-201ENST00000363816 102 ntBASIC4.18□□□□□ -1.74
PROM1O43490 RNU4-1-201ENST00000363925 141 ntBASIC4.18□□□□□ -1.74
PROM1O43490 Y_RNA.263-201ENST00000364659 114 ntBASIC4.18□□□□□ -1.74
PROM1O43490 RNA5SP22-201ENST00000365393 109 ntBASIC4.18□□□□□ -1.74
PROM1O43490 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PROM1O43490 U3.20-201ENST00000390909 217 ntBASIC4.18□□□□□ -1.74
PROM1O43490 SNORA48.7-201ENST00000391302 135 ntBASIC4.18□□□□□ -1.74
PROM1O43490 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 RPS4XP8-201ENST00000402039 771 ntBASIC4.18□□□□□ -1.74
PROM1O43490 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.18□□□□□ -1.74
PROM1O43490 RPL31P2-201ENST00000413849 377 ntBASIC4.18□□□□□ -1.74
PROM1O43490 SNRPFP1-201ENST00000414761 252 ntBASIC4.18□□□□□ -1.74
PROM1O43490 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.18□□□□□ -1.74
PROM1O43490 RPL23AP30-201ENST00000432419 501 ntBASIC4.18□□□□□ -1.74
PROM1O43490 AL606489.2-201ENST00000433886 234 ntBASIC4.18□□□□□ -1.74
PROM1O43490 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.18□□□□□ -1.74
PROM1O43490 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.18□□□□□ -1.74
PROM1O43490 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.18□□□□□ -1.74
PROM1O43490 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.18□□□□□ -1.74
PROM1O43490 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.18□□□□□ -1.74
PROM1O43490 RPS20P20-201ENST00000460498 340 ntBASIC4.18□□□□□ -1.74
PROM1O43490 AC010618.1-201ENST00000469924 477 ntBASIC4.18□□□□□ -1.74
PROM1O43490 RPL21P126-201ENST00000470049 478 ntBASIC4.18□□□□□ -1.74
PROM1O43490 AC083798.1-201ENST00000472671 131 ntBASIC4.18□□□□□ -1.74
PROM1O43490 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.18□□□□□ -1.74
PROM1O43490 MTCO2P30-201ENST00000503662 364 ntBASIC4.18□□□□□ -1.74
PROM1O43490 AC108145.1-201ENST00000503770 153 ntBASIC4.18□□□□□ -1.74
PROM1O43490 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.18□□□□□ -1.74
PROM1O43490 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.18□□□□□ -1.74
PROM1O43490 AC006499.6-201ENST00000511169 607 ntBASIC4.18□□□□□ -1.74
PROM1O43490 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 AL109766.1-201ENST00000555080 552 ntBASIC4.18□□□□□ -1.74
PROM1O43490 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.18□□□□□ -1.74
PROM1O43490 RPL23AP97-201ENST00000568955 471 ntBASIC4.18□□□□□ -1.74
PROM1O43490 AL160290.3-201ENST00000604869 165 ntBASIC4.18□□□□□ -1.74
PROM1O43490 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.18□□□□□ -1.74
PROM1O43490 AC087045.1-201ENST00000605856 382 ntBASIC4.18□□□□□ -1.74
PROM1O43490 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.18□□□□□ -1.74
PROM1O43490 AC010133.1-201ENST00000615809 842 ntBASIC4.18□□□□□ -1.74
PROM1O43490 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.18□□□□□ -1.74
PROM1O43490 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.18□□□□□ -1.74
PROM1O43490 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.18□□□□□ -1.74
PROM1O43490 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.18□□□□□ -1.74
PROM1O43490 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.18□□□□□ -1.74
PROM1O43490 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PROM1O43490 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PROM1O43490 CKAP2P1-201ENST00000555477 2049 ntBASIC4.17□□□□□ -1.74
PROM1O43490 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PROM1O43490 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PROM1O43490 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.17□□□□□ -1.74
PROM1O43490 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PROM1O43490 RNVU1-3-201ENST00000364313 161 ntBASIC4.17□□□□□ -1.74
PROM1O43490 RNA5SP515-201ENST00000364570 118 ntBASIC4.17□□□□□ -1.74
PROM1O43490 Y_RNA.279-201ENST00000364763 95 ntBASIC4.17□□□□□ -1.74
PROM1O43490 RNU6-169P-201ENST00000365336 107 ntBASIC4.17□□□□□ -1.74
PROM1O43490 SNORA57.1-201ENST00000391227 145 ntBASIC4.17□□□□□ -1.74
PROM1O43490 RPS20P14-201ENST00000412545 360 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.17□□□□□ -1.74
PROM1O43490 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.17□□□□□ -1.74
PROM1O43490 TMSB10P2-201ENST00000416049 131 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AL139095.3-201ENST00000419672 1203 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AL356387.2-201ENST00000422272 243 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.17□□□□□ -1.74
PROM1O43490 GPR143P-201ENST00000434155 205 ntBASIC4.17□□□□□ -1.74
PROM1O43490 UBE2V1P13-201ENST00000436983 439 ntBASIC4.17□□□□□ -1.74
PROM1O43490 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PROM1O43490 AL590399.6-201ENST00000446396 307 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AC133473.1-201ENST00000455173 299 ntBASIC4.17□□□□□ -1.74
PROM1O43490 DHFRP3-201ENST00000455595 559 ntBASIC4.17□□□□□ -1.74
PROM1O43490 RPS4XP10-201ENST00000465034 731 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AC055855.1-201ENST00000489563 579 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AC078817.1-201ENST00000492623 435 ntBASIC4.17□□□□□ -1.74
PROM1O43490 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.17□□□□□ -1.74
PROM1O43490 AC015795.1-201ENST00000513669 327 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.17□□□□□ -1.74
PROM1O43490 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.17□□□□□ -1.74
PROM1O43490 RNA5SP337-201ENST00000517007 109 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms