Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SNRPEP2-201ENST00000397592 279 ntBASIC3□□□□□ -1.93
CDX4O14627 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3□□□□□ -1.93
CDX4O14627 RAP1BP1-201ENST00000412709 553 ntBASIC3□□□□□ -1.93
CDX4O14627 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3□□□□□ -1.93
CDX4O14627 EI24P1-201ENST00000416584 867 ntBASIC3□□□□□ -1.93
CDX4O14627 TIMM9P2-201ENST00000419324 266 ntBASIC3□□□□□ -1.93
CDX4O14627 AC011233.1-201ENST00000422812 283 ntBASIC3□□□□□ -1.93
CDX4O14627 RPL21P112-201ENST00000434403 463 ntBASIC3□□□□□ -1.93
CDX4O14627 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3□□□□□ -1.93
CDX4O14627 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 RPS24P13-201ENST00000442520 397 ntBASIC3□□□□□ -1.93
CDX4O14627 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3□□□□□ -1.93
CDX4O14627 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3□□□□□ -1.93
CDX4O14627 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3□□□□□ -1.93
CDX4O14627 PABPC1P3-201ENST00000469174 459 ntBASIC3□□□□□ -1.93
CDX4O14627 SYPL1P1-201ENST00000473622 768 ntBASIC3□□□□□ -1.93
CDX4O14627 RPL23AP55-201ENST00000498163 452 ntBASIC3□□□□□ -1.93
CDX4O14627 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3□□□□□ -1.93
CDX4O14627 AC114981.1-201ENST00000503897 678 ntBASIC3□□□□□ -1.93
CDX4O14627 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3□□□□□ -1.93
CDX4O14627 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3□□□□□ -1.93
CDX4O14627 MTCO3P28-201ENST00000513351 515 ntBASIC3□□□□□ -1.93
CDX4O14627 RN7SKP272-201ENST00000516988 232 ntBASIC3□□□□□ -1.93
CDX4O14627 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3□□□□□ -1.93
CDX4O14627 AC087373.1-201ENST00000524920 491 ntBASIC3□□□□□ -1.93
CDX4O14627 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3□□□□□ -1.93
CDX4O14627 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 PDCL2P2-201ENST00000533651 189 ntBASIC3□□□□□ -1.93
CDX4O14627 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3□□□□□ -1.93
CDX4O14627 AC010198.2-201ENST00000550612 259 ntBASIC3□□□□□ -1.93
CDX4O14627 AC091544.4-201ENST00000555268 342 ntBASIC3□□□□□ -1.93
CDX4O14627 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3□□□□□ -1.93
CDX4O14627 AL669831.4-202ENST00000590817 238 ntBASIC3□□□□□ -1.93
CDX4O14627 AC040904.1-201ENST00000590850 223 ntBASIC3□□□□□ -1.93
CDX4O14627 AL109653.1-201ENST00000603091 248 ntBASIC3□□□□□ -1.93
CDX4O14627 AC080013.3-201ENST00000606839 578 ntBASIC3□□□□□ -1.93
CDX4O14627 AC080013.4-201ENST00000607624 649 ntBASIC3□□□□□ -1.93
CDX4O14627 AL360219.1-201ENST00000610230 366 ntBASIC3□□□□□ -1.93
CDX4O14627 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3□□□□□ -1.93
CDX4O14627 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3□□□□□ -1.93
CDX4O14627 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3□□□□□ -1.93
CDX4O14627 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3□□□□□ -1.93
CDX4O14627 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3□□□□□ -1.93
CDX4O14627 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDX4O14627 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.99□□□□□ -1.93
CDX4O14627 ZNF826P-207ENST00000622273 1910 ntBASIC2.99□□□□□ -1.93
CDX4O14627 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CDX4O14627 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX4O14627 MIR423-201ENST00000362201 94 ntBASIC2.99□□□□□ -1.93
CDX4O14627 SNORA7.2-201ENST00000364446 145 ntBASIC2.99□□□□□ -1.93
CDX4O14627 RNU6-621P-201ENST00000364752 109 ntBASIC2.99□□□□□ -1.93
CDX4O14627 RNU6-878P-201ENST00000384578 110 ntBASIC2.99□□□□□ -1.93
CDX4O14627 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDX4O14627 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX4O14627 RNA5SP56-201ENST00000410277 118 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AL139421.1-201ENST00000423010 169 ntBASIC2.99□□□□□ -1.93
CDX4O14627 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDX4O14627 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX4O14627 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX4O14627 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX4O14627 AC108734.1-201ENST00000439549 399 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.99□□□□□ -1.93
CDX4O14627 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX4O14627 TXNP1-201ENST00000441872 371 ntBASIC2.99□□□□□ -1.93
CDX4O14627 RPL39P6-201ENST00000448289 150 ntBASIC2.99□□□□□ -1.93
CDX4O14627 RPS20P24-201ENST00000457473 361 ntBASIC2.99□□□□□ -1.93
CDX4O14627 RN7SL93P-201ENST00000463035 293 ntBASIC2.99□□□□□ -1.93
CDX4O14627 RPL23AP62-201ENST00000463396 453 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AC082651.2-201ENST00000496833 166 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AC108078.3-201ENST00000502633 489 ntBASIC2.99□□□□□ -1.93
CDX4O14627 MTCO3P44-201ENST00000510977 541 ntBASIC2.99□□□□□ -1.93
CDX4O14627 MRPS33P3-201ENST00000513456 322 ntBASIC2.99□□□□□ -1.93
CDX4O14627 RNU6-1129P-201ENST00000515964 104 ntBASIC2.99□□□□□ -1.93
CDX4O14627 RN7SKP244-201ENST00000516513 307 ntBASIC2.99□□□□□ -1.93
CDX4O14627 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX4O14627 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX4O14627 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.99□□□□□ -1.93
CDX4O14627 AP003461.1-201ENST00000528866 78 ntBASIC2.99□□□□□ -1.93
CDX4O14627 MTCYBP41-201ENST00000528913 1123 ntBASIC2.99□□□□□ -1.93
CDX4O14627 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX4O14627 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX4O14627 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX4O14627 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX4O14627 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX4O14627 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.99□□□□□ -1.93
CDX4O14627 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.99□□□□□ -1.93
CDX4O14627 AC141257.3-201ENST00000572906 215 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AC138761.3-201ENST00000579993 334 ntBASIC2.99□□□□□ -1.93
CDX4O14627 MIR4637-201ENST00000582405 84 ntBASIC2.99□□□□□ -1.93
CDX4O14627 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.99□□□□□ -1.93
CDX4O14627 AC010620.1-201ENST00000601088 1102 ntBASIC2.99□□□□□ -1.93
CDX4O14627 Z99497.2-201ENST00000603634 310 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AL358072.1-201ENST00000604156 575 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AC069304.2-201ENST00000605154 435 ntBASIC2.99□□□□□ -1.93
CDX4O14627 BNIP3P10-201ENST00000605360 577 ntBASIC2.99□□□□□ -1.93
CDX4O14627 AC018638.7-201ENST00000605836 1114 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms