Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AL670379.7-201ENST00000605823 252 ntBASIC4.61□□□□□ -1.67
CBX4O00257 HMGN2P28-201ENST00000606102 262 ntBASIC4.61□□□□□ -1.67
CBX4O00257 AC020634.1-201ENST00000608701 549 ntBASIC4.61□□□□□ -1.67
CBX4O00257 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.61□□□□□ -1.67
CBX4O00257 AL450472.3-201ENST00000615578 367 ntBASIC4.61□□□□□ -1.67
CBX4O00257 AC131238.1-201ENST00000617135 328 ntBASIC4.61□□□□□ -1.67
CBX4O00257 AC233309.1-201ENST00000619522 751 ntBASIC4.61□□□□□ -1.67
CBX4O00257 AC079684.1-201ENST00000621405 437 ntBASIC4.61□□□□□ -1.67
CBX4O00257 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.61□□□□□ -1.67
CBX4O00257 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CBX4O00257 AC025031.4-201ENST00000621248 3271 ntBASIC4.61□□□□□ -1.67
CBX4O00257 EXOC5P1-201ENST00000510543 1969 ntBASIC4.61□□□□□ -1.67
CBX4O00257 MAPK10-303ENST00000641324 3959 ntBASIC4.61□□□□□ -1.67
CBX4O00257 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CBX4O00257 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CBX4O00257 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CBX4O00257 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CBX4O00257 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CBX4O00257 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CBX4O00257 AC006971.1-201ENST00000407916 4486 ntBASIC4.61□□□□□ -1.67
CBX4O00257 RIOK3P1-201ENST00000418778 1528 ntBASIC4.61□□□□□ -1.67
CBX4O00257 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.61□□□□□ -1.67
CBX4O00257 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
CBX4O00257 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CBX4O00257 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CBX4O00257 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CBX4O00257 CPHL1P-201ENST00000461341 3407 ntBASIC4.6□□□□□ -1.67
CBX4O00257 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.6□□□□□ -1.67
CBX4O00257 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.6□□□□□ -1.67
CBX4O00257 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CBX4O00257 RPL7P26-201ENST00000333817 754 ntBASIC4.6□□□□□ -1.67
CBX4O00257 RNA5SP509-201ENST00000364577 119 ntBASIC4.6□□□□□ -1.67
CBX4O00257 AL136116.1-201ENST00000403591 381 ntBASIC4.6□□□□□ -1.67
CBX4O00257 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.6□□□□□ -1.67
CBX4O00257 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 MTND1P18-201ENST00000448191 573 ntBASIC4.6□□□□□ -1.67
CBX4O00257 AC073415.1-201ENST00000449240 153 ntBASIC4.6□□□□□ -1.67
CBX4O00257 AC012671.1-201ENST00000451912 203 ntBASIC4.6□□□□□ -1.67
CBX4O00257 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.6□□□□□ -1.67
CBX4O00257 RPS29P15-201ENST00000458329 171 ntBASIC4.6□□□□□ -1.67
CBX4O00257 AC108751.2-201ENST00000469993 231 ntBASIC4.6□□□□□ -1.67
CBX4O00257 RN7SL432P-201ENST00000484057 298 ntBASIC4.6□□□□□ -1.67
CBX4O00257 HMGN1P12-201ENST00000499125 195 ntBASIC4.6□□□□□ -1.67
CBX4O00257 RPL38P4-201ENST00000502376 214 ntBASIC4.6□□□□□ -1.67
CBX4O00257 MTCO2P30-201ENST00000503662 364 ntBASIC4.6□□□□□ -1.67
CBX4O00257 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.6□□□□□ -1.67
CBX4O00257 OR5AL2P-201ENST00000532185 920 ntBASIC4.6□□□□□ -1.67
CBX4O00257 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.6□□□□□ -1.67
CBX4O00257 MIR3160-1-201ENST00000577972 85 ntBASIC4.6□□□□□ -1.67
CBX4O00257 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.6□□□□□ -1.67
CBX4O00257 AP001029.3-201ENST00000588063 596 ntBASIC4.6□□□□□ -1.67
CBX4O00257 ARF4P1-201ENST00000605447 541 ntBASIC4.6□□□□□ -1.67
CBX4O00257 AC012443.1-201ENST00000605605 231 ntBASIC4.6□□□□□ -1.67
CBX4O00257 MIR6716-201ENST00000613413 80 ntBASIC4.6□□□□□ -1.67
CBX4O00257 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 AC055839.1-201ENST00000634467 498 ntBASIC4.6□□□□□ -1.67
CBX4O00257 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.6□□□□□ -1.67
CBX4O00257 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
CBX4O00257 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CBX4O00257 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CBX4O00257 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CBX4O00257 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CBX4O00257 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.59□□□□□ -1.67
CBX4O00257 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.59□□□□□ -1.67
CBX4O00257 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CBX4O00257 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CBX4O00257 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CBX4O00257 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CBX4O00257 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CBX4O00257 RNU6-960P-201ENST00000364056 120 ntBASIC4.59□□□□□ -1.67
CBX4O00257 SSXP9-201ENST00000417503 292 ntBASIC4.59□□□□□ -1.67
CBX4O00257 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CBX4O00257 MTCYBP8-201ENST00000422855 651 ntBASIC4.59□□□□□ -1.67
CBX4O00257 RAC1P6-201ENST00000423911 575 ntBASIC4.59□□□□□ -1.67
CBX4O00257 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.59□□□□□ -1.67
CBX4O00257 MTND4LP16-201ENST00000440828 295 ntBASIC4.59□□□□□ -1.67
CBX4O00257 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.59□□□□□ -1.67
CBX4O00257 RPL23AP43-201ENST00000446445 471 ntBASIC4.59□□□□□ -1.67
CBX4O00257 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.59□□□□□ -1.67
CBX4O00257 AC139769.1-204ENST00000472297 1931 ntBASIC4.59□□□□□ -1.67
CBX4O00257 EIF4EP3-201ENST00000498782 656 ntBASIC4.59□□□□□ -1.67
CBX4O00257 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.59□□□□□ -1.67
CBX4O00257 AC010486.1-201ENST00000511793 424 ntBASIC4.59□□□□□ -1.67
CBX4O00257 AC015795.1-201ENST00000513669 327 ntBASIC4.59□□□□□ -1.67
CBX4O00257 RN7SKP46-201ENST00000515942 234 ntBASIC4.59□□□□□ -1.67
CBX4O00257 RNA5SP503-201ENST00000517047 117 ntBASIC4.59□□□□□ -1.67
CBX4O00257 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.59□□□□□ -1.67
CBX4O00257 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.59□□□□□ -1.67
CBX4O00257 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.59□□□□□ -1.67
CBX4O00257 AC018638.8-201ENST00000588755 281 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms