Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC188H7C350 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCDC188H7C350 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC188H7C350 AC092447.10-201ENST00000620607 1652 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC188H7C350 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CCDC188H7C350 RNU1-70P-201ENST00000362618 164 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 RNA5SP88-201ENST00000365560 109 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 RNU6-114P-201ENST00000384704 105 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 TAS2R15P-201ENST00000390674 928 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 RN7SKP202-201ENST00000410439 330 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 PIGPP2-201ENST00000411569 458 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC188H7C350 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 SETP5-201ENST00000437270 562 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 AL831737.1-201ENST00000441288 271 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 ATP5C1P1-201ENST00000441945 895 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 MTND2P24-201ENST00000453434 806 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC188H7C350 RNA5SP310-201ENST00000459084 116 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 AL049714.1-201ENST00000466686 347 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC023632.4-201ENST00000517783 191 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 HMGN1P28-201ENST00000521340 364 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 MTCO1P49-201ENST00000523429 802 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 AC103843.2-201ENST00000530523 682 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC023538.1-201ENST00000534576 736 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC063944.3-201ENST00000609969 533 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC009464.1-201ENST00000615731 469 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 PLCE1P1-201ENST00000622094 305 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 AC091903.1-201ENST00000624322 454 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC188H7C350 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC188H7C350 AC104454.1-201ENST00000421341 1401 ntBASIC3.42□□□□□ -1.86
CCDC188H7C350 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC188H7C350 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC188H7C350 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC188H7C350 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CCDC188H7C350 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC188H7C350 DEFB108F-201ENST00000344638 222 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 SNORA62.3-201ENST00000365110 153 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 RNU6-359P-201ENST00000365466 108 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC188H7C350 RNU6-1200P-201ENST00000384162 107 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 SNORA46-201ENST00000384762 135 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 MIR591-201ENST00000385290 95 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.41□□□□□ -1.86
CCDC188H7C350 HMGB1P11-201ENST00000413899 637 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 TMEM167AP1-201ENST00000423409 219 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 RPL27AP8-201ENST00000424277 446 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC188H7C350 ATP5JP1-201ENST00000431631 322 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC188H7C350 HMGN2P20-201ENST00000437531 273 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC188H7C350 AC108734.1-201ENST00000439549 399 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 RPL17P49-201ENST00000443728 411 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC188H7C350 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC188H7C350 AC034236.1-201ENST00000469891 373 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AC012181.1-201ENST00000479895 423 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 APOOP4-201ENST00000513530 597 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 RNU6-798P-201ENST00000516912 103 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 FAM60DP-201ENST00000524174 632 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 DEFB108D-201ENST00000527787 222 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AC013828.2-201ENST00000532487 235 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC188H7C350 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC188H7C350 AC006130.2-201ENST00000586202 326 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC188H7C350 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC188H7C350 AC004067.1-201ENST00000608733 700 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AC103710.4-201ENST00000609301 899 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC188H7C350 AC068831.7-201ENST00000616954 363 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AC009159.2-201ENST00000617603 606 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 XIST_intron.1-201ENST00000619444 68 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AC008993.2-201ENST00000631744 806 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 AC009812.4-201ENST00000569134 1805 ntBASIC3.41□□□□□ -1.86
CCDC188H7C350 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC188H7C350 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC188H7C350 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CCDC188H7C350 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC188H7C350 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC188H7C350 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC188H7C350 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC188H7C350 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC188H7C350 AL672167.1-206ENST00000356293 943 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms