Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 RPL23AP55-201ENST00000498163 452 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC105313.1-201ENST00000509121 353 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC117522.2-201ENST00000510049 657 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-1003P-201ENST00000517099 105 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-1073P-201ENST00000517182 106 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SETP2-201ENST00000553886 926 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 BNIP3P5-201ENST00000562290 498 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ZNF192P1-203ENST00000565888 810 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AP005136.1-201ENST00000579765 429 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL360181.4-201ENST00000621752 134 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR7153-201ENST00000637758 57 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORD116-9-201ENST00000384000 95 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORD116-3-201ENST00000384287 95 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORD116-7-201ENST00000384404 95 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORD116-5-201ENST00000384462 95 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-114P-201ENST00000384704 105 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR141-201ENST00000384975 95 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-882P-201ENST00000391025 103 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC007390.1-201ENST00000415722 356 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MTCO1P39-201ENST00000426148 480 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC079780.1-201ENST00000428259 207 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 UBE2V1P13-201ENST00000436983 439 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC008264.1-201ENST00000447612 367 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL122001.1-201ENST00000457027 370 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AP1S2P1-201ENST00000457344 379 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 U3.44-201ENST00000458938 192 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC116337.2-201ENST00000477662 156 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AP000797.1-201ENST00000478870 387 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RN7SKP244-201ENST00000516513 307 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC104027.1-201ENST00000521887 300 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ACTR3BP3-201ENST00000565577 979 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR5047-201ENST00000579212 100 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR3690-201ENST00000580266 75 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORD84-203ENST00000584275 78 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC083760.1-201ENST00000589621 670 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC012065.4-201ENST00000602445 679 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR6130-201ENST00000619419 109 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL161637.1-201ENST00000622380 412 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC048347.1-201ENST00000624621 427 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC093591.3-201ENST00000634516 308 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC004972.1-201ENST00000623934 2209 ntBASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MTND4P4-201ENST00000439033 1366 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC011460.1-201ENST00000636268 1834 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-600P-201ENST00000362524 99 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MTCYBP36-201ENST00000404146 440 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 CCDC58P2-201ENST00000417131 366 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SSXP9-201ENST00000417503 292 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ARF4P2-201ENST00000430209 526 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 THAP5P1-201ENST00000439089 262 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL359073.1-201ENST00000448036 403 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MTCO1P42-201ENST00000457379 726 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms