Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC6Q9Y625 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
GPC6Q9Y625 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC6Q9Y625 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GPC6Q9Y625 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC6Q9Y625 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GPC6Q9Y625 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC6Q9Y625 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 AC073136.1-201ENST00000449426 2884 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC6Q9Y625 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 RNU6-325P-201ENST00000411132 105 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 SSXP9-201ENST00000417503 292 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 RPL21P38-201ENST00000418090 167 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 HMGN2P13-201ENST00000476476 274 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 RPL31P60-201ENST00000478450 367 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 RPL7P23-201ENST00000493874 747 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 AC025458.1-201ENST00000506046 166 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 SNORA81.3-201ENST00000517283 198 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 AC144568.1-201ENST00000520139 137 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 MIR4776-2-201ENST00000580204 80 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 AL596275.2-204ENST00000641628 552 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 AL596275.2-206ENST00000641957 626 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC6Q9Y625 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC6Q9Y625 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GPC6Q9Y625 SAMMSON-213ENST00000641336 1521 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC6Q9Y625 AC083843.2-201ENST00000568248 6253 ntBASIC5.37□□□□□ -1.55
GPC6Q9Y625 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 RNU1-146P-201ENST00000364015 165 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 RN7SKP275-201ENST00000364626 301 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 RNU6-338P-201ENST00000383888 105 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 RNU6-14P-201ENST00000384630 106 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 CYB5AP4-201ENST00000396692 399 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 AC013442.1-201ENST00000397347 228 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 RPL21P67-201ENST00000402896 478 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 HMGB1P27-201ENST00000431429 603 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 PTMAP6-201ENST00000439110 327 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 GEMIN8P3-201ENST00000445417 720 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 LINC01399-202ENST00000458450 244 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 AL133445.1-201ENST00000467051 452 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 RN7SL193P-201ENST00000491708 276 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 OR4H12P-201ENST00000556269 907 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 AC068790.4-201ENST00000602474 263 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 AC005344.1-201ENST00000613391 459 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 AC009229.4-201ENST00000623854 1947 ntBASIC5.36□□□□□ -1.55
GPC6Q9Y625 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC6Q9Y625 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
GPC6Q9Y625 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
GPC6Q9Y625 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.35□□□□□ -1.55
GPC6Q9Y625 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.35□□□□□ -1.55
GPC6Q9Y625 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.35□□□□□ -1.55
GPC6Q9Y625 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
GPC6Q9Y625 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GPC6Q9Y625 Y_RNA.54-201ENST00000362766 105 ntBASIC5.35□□□□□ -1.55
GPC6Q9Y625 Y_RNA.270-201ENST00000364693 104 ntBASIC5.35□□□□□ -1.55
GPC6Q9Y625 Y_RNA.462-201ENST00000384268 102 ntBASIC5.35□□□□□ -1.55
GPC6Q9Y625 SNORA11.3-201ENST00000408471 128 ntBASIC5.35□□□□□ -1.55
GPC6Q9Y625 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms