Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 AP004607.3-201ENST00000530354 3915 ntBASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB11Q9Y5F2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 U3.7-201ENST00000363668 216 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-263P-201ENST00000363811 107 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 U3.10-201ENST00000364459 214 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 RN7SKP186-201ENST00000365371 303 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 RNU11-201ENST00000387069 134 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AL513475.1-201ENST00000406602 315 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-1203P-201ENST00000410703 110 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 RNU2-25P-201ENST00000411041 191 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 MRPL53P1-201ENST00000414323 319 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 CRIP1P1-201ENST00000427567 185 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AC104332.1-201ENST00000440471 797 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 GEMIN8P3-201ENST00000445417 720 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 FRG2FP-204ENST00000453982 852 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 RPL37P6-202ENST00000464216 403 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AC008958.1-201ENST00000511047 682 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 MIR5701-3-201ENST00000578890 82 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 MIR5701-1-201ENST00000585138 82 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AL360012.1-201ENST00000602813 131 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AL355877.2-201ENST00000603670 358 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 MIR3976-201ENST00000606807 139 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 MIR5701-2-201ENST00000615634 82 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AP001282.2-201ENST00000616149 309 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 PRO1804-201ENST00000623780 2050 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 AC004656.1-201ENST00000568479 4951 ntBASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB11Q9Y5F2 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AC020633.1-201ENST00000468439 2247 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.324-201ENST00000365165 102 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 U8.8-201ENST00000365399 135 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.533-201ENST00000384596 114 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 Y_RNA.534-201ENST00000384599 112 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-146P-201ENST00000384602 108 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AL133388.1-201ENST00000404509 287 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 U3.42-201ENST00000408746 214 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 RNU2-14P-201ENST00000411053 191 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 BMS1P17-202ENST00000416720 316 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AL353621.1-201ENST00000418219 243 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AC007098.1-201ENST00000420122 367 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 C4BPAP2-201ENST00000428434 478 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AC092423.1-201ENST00000430165 186 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 MYL8P-204ENST00000431574 518 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 RPS11P1-201ENST00000451072 473 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 HMGN2P13-201ENST00000476476 274 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-941P-201ENST00000516346 108 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 SNORA43.3-201ENST00000517240 103 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 RNU6-840P-201ENST00000517275 65 ntBASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB11Q9Y5F2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms