Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.15□□□□□ -1.43
LHX6Q9UPM6 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
LHX6Q9UPM6 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RNA5SP477-201ENST00000362639 119 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 SNORD14B-201ENST00000364533 90 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RNU6-281P-201ENST00000384212 103 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RNU6-1145P-201ENST00000384246 107 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 MIR130B-202ENST00000385018 82 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RNU6-821P-201ENST00000390995 107 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 U3.22-201ENST00000391120 215 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RPS3AP2-201ENST00000407190 754 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RPL21P50-201ENST00000417698 477 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AL158823.1-201ENST00000418441 478 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 BPY2DP-201ENST00000422208 265 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 CYP4F32P-201ENST00000426492 504 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AL353705.4-201ENST00000449661 238 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RN7SL826P-201ENST00000479724 288 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RPL23AP49-201ENST00000492925 468 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 RNU6-377P-201ENST00000515965 102 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 HMGB1P14-201ENST00000557424 591 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 BNIP3P5-201ENST00000562290 498 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 MIR3691-201ENST00000578066 90 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AC004805.3-201ENST00000603178 310 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 AC079753.1-201ENST00000623243 3868 ntBASIC6.14□□□□□ -1.43
LHX6Q9UPM6 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
LHX6Q9UPM6 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AC007938.2-201ENST00000604666 2634 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 RN7SKP160-201ENST00000363804 340 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 RN7SKP62-201ENST00000384539 329 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 MIR329-1-201ENST00000385028 80 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 SNORA26.2-201ENST00000390922 122 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 CYCSP17-201ENST00000407870 315 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 RNU6-1025P-201ENST00000410629 104 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 RNY4P29-201ENST00000410801 97 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AL391219.1-201ENST00000422570 483 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AC064862.4-201ENST00000442180 334 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AP003327.1-201ENST00000529684 127 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AC022404.1-201ENST00000555320 273 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 MIR4782-201ENST00000577987 79 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 CTSLP2-201ENST00000580501 394 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 MIR3145-201ENST00000580727 82 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 AC024153.1-201ENST00000603103 365 ntBASIC6.13□□□□□ -1.43
LHX6Q9UPM6 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LHX6Q9UPM6 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms