Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 RNU4-44P-201ENST00000363050 141 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 RN7SKP145-201ENST00000363291 303 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 RNA5SP223-201ENST00000365174 120 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 SNORA19-201ENST00000384737 128 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 RPL21P1-201ENST00000399532 476 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC069218.2-201ENST00000411665 344 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC093655.2-201ENST00000425735 631 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC234779.1-201ENST00000425910 285 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC073910.1-201ENST00000445047 438 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AL392103.1-201ENST00000447000 198 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 RPS3AP41-201ENST00000462701 778 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC090686.1-201ENST00000481577 749 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 GZMAP1-201ENST00000503054 631 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC108078.2-201ENST00000510750 236 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 TBCAP3-201ENST00000512475 312 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 SNORA14.1-201ENST00000516113 141 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 RNA5SP384-201ENST00000516615 116 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 RNU6-1092P-201ENST00000516955 87 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 RANP3-201ENST00000530970 276 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC090022.1-201ENST00000546569 311 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AC108738.1-201ENST00000603703 237 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 IGHV3-29-201ENST00000604817 344 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 AL512624.1-201ENST00000613638 469 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 AL590099.1-201ENST00000615276 138 ntBASIC4.51□□□□□ -1.69
GCM1Q9NP62 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GCM1Q9NP62 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
GCM1Q9NP62 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GCM1Q9NP62 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GCM1Q9NP62 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
GCM1Q9NP62 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 Y_RNA.2-201ENST00000362330 96 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 Y_RNA.60-201ENST00000362831 98 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 RN7SKP224-201ENST00000364140 325 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 Y_RNA.399-201ENST00000383955 105 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 SNORA41-201ENST00000384675 132 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 AC079809.1-201ENST00000415468 276 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 RPLP0P7-201ENST00000416050 667 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 AL358176.3-201ENST00000420757 454 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 AC243428.1-201ENST00000421099 264 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 AL355433.1-201ENST00000422804 300 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 AL138785.1-201ENST00000425821 331 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 AC092162.1-201ENST00000432828 434 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 RPL23AP50-201ENST00000434149 455 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 RPL21P112-201ENST00000434403 463 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 RPL21P2-201ENST00000440049 481 ntBASIC4.5□□□□□ -1.69
GCM1Q9NP62 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.5□□□□□ -1.69
GCM1Q9NP62 CYCSP24-201ENST00000445119 316 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms