Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RPS24P6-201ENST00000452670 400 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 MTCO3P2-201ENST00000457365 171 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC084024.2-201ENST00000503480 791 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC096725.1-201ENST00000514266 313 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 RNU6-885P-201ENST00000516607 104 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC109329.2-201ENST00000519658 482 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 SYF2P1-201ENST00000550658 413 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 RPL21P136-201ENST00000605378 396 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 AC008759.3-201ENST00000613300 508 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 VN1R7P-201ENST00000619242 903 ntBASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
RPAP1Q9BWH6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 AL355615.1-201ENST00000406187 641 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 YPEL5P1-201ENST00000419731 367 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 MTCYBP15-201ENST00000433123 1127 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 HMGN2P20-201ENST00000437531 273 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 HMGB1P12-201ENST00000438594 598 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 RPL23AP16-201ENST00000441715 421 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 TRBV26-201ENST00000456572 344 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 OR6K1P-201ENST00000456766 971 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 HMGN2P16-201ENST00000456802 261 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 AC010285.1-201ENST00000470580 392 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 AC010301.1-201ENST00000473936 355 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 SNORA31.20-201ENST00000517111 133 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 ARL2BPP5-201ENST00000523141 481 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 ZNF705CP-201ENST00000530515 889 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 MTND2P41-201ENST00000637599 773 ntBASIC3.2□□□□□ -1.9
RPAP1Q9BWH6 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 SNORA25.6-201ENST00000364121 118 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 RNU1-100P-201ENST00000365255 165 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 MIR592-201ENST00000384959 97 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 MCTS2P-201ENST00000394552 546 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AL354719.1-201ENST00000406535 843 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AL133384.1-201ENST00000412744 351 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 RAD23BP2-201ENST00000416003 1207 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AL590103.1-201ENST00000434488 307 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC010095.1-201ENST00000443543 144 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AL024509.2-201ENST00000493462 493 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 MTCO3P27-201ENST00000514397 196 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 RNU6-467P-201ENST00000517027 110 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC239860.2-201ENST00000525886 270 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC092451.2-201ENST00000538746 658 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC093519.1-201ENST00000566109 298 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 XIAPP1-201ENST00000603162 600 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 BNIP3P10-201ENST00000605360 577 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC006963.1-201ENST00000624003 1052 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AC092184.1-201ENST00000625042 715 ntBASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RPAP1Q9BWH6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 RPL7P52-201ENST00000449200 742 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 HMGB1P15-201ENST00000453854 435 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 PABPC1P3-201ENST00000469174 459 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 GAPDHP39-201ENST00000481866 979 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms