Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 SNORD115-47-201ENST00000391226 86 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 RNU2-21P-201ENST00000410368 188 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 RPS29P4-201ENST00000414733 161 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 MTCO2P5-201ENST00000422621 426 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 Z99127.3-201ENST00000448158 395 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 HMGB3P22-202ENST00000451823 572 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 HMGB1P36-201ENST00000487709 576 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 TRBV12-2-201ENST00000489763 344 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 FCF1P3-201ENST00000496394 590 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 HMGB1P29-201ENST00000505659 499 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AL391840.1-201ENST00000571144 367 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 NRBF2P1-201ENST00000587407 859 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 HMGN1P30-201ENST00000589286 268 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 BNIP3P30-201ENST00000601184 574 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 RPL23AP92-201ENST00000603609 255 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AC069200.1-201ENST00000609511 323 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 AL359880.1-201ENST00000621879 266 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 CYP3A51P-201ENST00000633513 256 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 MIR3688-2-201ENST00000636963 87 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 Z73965.1-201ENST00000623412 2297 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 AC007823.1-201ENST00000569932 1566 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RNU6-1243P-201ENST00000364028 107 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RNU4-12P-201ENST00000365233 139 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 Y_RNA.390-201ENST00000383932 102 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RNU6-1103P-201ENST00000384150 107 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 Y_RNA.450-201ENST00000384198 113 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 MTCO3P40-201ENST00000392516 676 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RPS20P2-201ENST00000402520 389 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RPL7P25-201ENST00000404151 721 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RAP1BP3-201ENST00000407180 549 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 MIR1277-201ENST00000408536 78 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RNA5SP44-201ENST00000410446 133 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 DPPA2P1-201ENST00000428060 556 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 CYCSP43-201ENST00000438233 310 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 snoU13.7-201ENST00000459220 104 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 FAM92A1P2-202ENST00000504766 877 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 ARL2BPP6-201ENST00000512757 439 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RNU2-46P-201ENST00000517038 113 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 AL157394.1-201ENST00000562983 1224 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 BNIP3P22-201ENST00000593399 556 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 BBIP1P1-201ENST00000602999 279 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 AL139286.1-201ENST00000604465 483 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 AC103858.2-201ENST00000621471 543 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 MIR6863-201ENST00000636112 90 ntBASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
UBE3BQ7Z3V4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 AL049780.3-201ENST00000624612 1583 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 SNORD9-201ENST00000362566 104 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 RNU6-744P-201ENST00000365557 107 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 RNU6-1316P-201ENST00000384242 108 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 AC069218.2-201ENST00000411665 344 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 USP9YP6-201ENST00000413550 854 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 SPA17P1-201ENST00000416656 452 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 MTCYBP24-201ENST00000420387 1106 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 RPL30P3-201ENST00000424262 333 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 MTND4LP10-201ENST00000435146 291 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 RPL17P49-201ENST00000443728 411 ntBASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.62□□□□□ -1.67
UBE3BQ7Z3V4 PABPC1P3-201ENST00000469174 459 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms