Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 AC007834.2-201ENST00000536310 343 ntBASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 AC006130.2-201ENST00000586202 326 ntBASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 AC068313.1-201ENST00000604028 1008 ntBASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 AC122133.1-201ENST00000613964 233 ntBASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
NUP54Q7Z3B4 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 FRG1BP-201ENST00000278882 761 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 RNU6-553P-201ENST00000364047 96 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 MIR554-201ENST00000384874 96 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AL356421.1-201ENST00000403255 413 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 HSPE1P8-201ENST00000406997 288 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 USP9YP26-201ENST00000421008 661 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 RSU1P2-202ENST00000437884 485 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 SKP1P1-201ENST00000438081 489 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 LSM1P1-201ENST00000438629 273 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 RPL7P15-201ENST00000461190 712 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AP001025.2-201ENST00000490908 477 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 RPF2P2-201ENST00000504693 896 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC022483.1-201ENST00000514020 567 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 SNORA70.16-201ENST00000516390 95 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 OSBPL9P5-201ENST00000542581 171 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC135628.1-201ENST00000568867 534 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC011260.1-201ENST00000578420 472 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AP001004.1-201ENST00000582468 324 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AL109618.2-201ENST00000605527 211 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 BRDTP1-201ENST00000605735 677 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 RNU1-30P-201ENST00000606575 163 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC097468.3-201ENST00000607956 456 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC079684.1-201ENST00000621405 437 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC078883.4-201ENST00000623218 367 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC034229.5-201ENST00000624258 185 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 AC008568.2-201ENST00000623862 2313 ntBASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.43□□□□□ -1.86
NUP54Q7Z3B4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC011460.1-201ENST00000636268 1834 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 RNU6-660P-201ENST00000364566 109 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC007066.1-201ENST00000392902 381 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 MTCO1P17-201ENST00000411522 491 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 RHEBP3-201ENST00000411920 351 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 HMGB1P11-201ENST00000413899 637 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 DPPA2P1-201ENST00000428060 556 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AL592447.1-201ENST00000447592 540 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AP000542.1-201ENST00000448473 371 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 HMGB3P8-201ENST00000449709 577 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 SNORD121B-201ENST00000458838 81 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC091564.1-201ENST00000464563 479 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC017037.2-201ENST00000513850 890 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 RNA5SP208-201ENST00000516156 78 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 RN7SKP83-201ENST00000516512 178 ntBASIC3.42□□□□□ -1.86
NUP54Q7Z3B4 PAICSP4-201ENST00000517543 1253 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms