Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-560P-201ENST00000364007 108 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 Y_RNA.315-201ENST00000365117 102 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-639P-201ENST00000384074 107 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 MIR320B1-201ENST00000390209 79 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AL109755.1-201ENST00000401791 649 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AL603766.1-201ENST00000407763 664 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AL450338.1-201ENST00000407987 512 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 RNA5SP104-201ENST00000410989 118 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 RNA5SP39-201ENST00000411245 120 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC048351.1-201ENST00000420064 602 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AL160175.1-201ENST00000428124 247 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AL669831.1-202ENST00000428504 417 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 TIMM9P3-201ENST00000428659 274 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AL627224.1-201ENST00000448334 444 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC104306.1-201ENST00000449702 371 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 SNRPGP6-201ENST00000451124 220 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 EIF4A1P11-201ENST00000451239 222 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 SNORD19B-201ENST00000459623 84 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 RPS20P20-201ENST00000460498 340 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC010469.1-201ENST00000463864 576 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC093770.1-201ENST00000511559 571 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 SEPT14P4-201ENST00000513445 186 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC112206.3-201ENST00000514578 389 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 SNORA19.2-201ENST00000516013 114 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-347P-201ENST00000516658 105 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 HIF1AP1-201ENST00000553642 175 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC012254.4-201ENST00000588843 273 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC011712.1-201ENST00000588959 234 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC244505.7-201ENST00000599675 272 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 MTCO3P22-201ENST00000603219 784 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AP004372.1-201ENST00000604842 844 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AL136363.1-201ENST00000605349 337 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC018462.2-201ENST00000605375 395 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC107214.2-201ENST00000608204 634 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC116447.1-201ENST00000613153 453 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC005344.1-201ENST00000613391 459 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 FAM157A-202ENST00000615155 405 ntBASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
BHLHA9Q7RTU4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 BDP1P-201ENST00000582658 1990 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 AP004289.2-201ENST00000444413 1457 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-253P-201ENST00000384730 105 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-908P-201ENST00000410160 94 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 RN7SKP202-201ENST00000410439 330 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 RNU6-603P-201ENST00000411403 107 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 OR9R1P-201ENST00000412200 877 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 PMCHL1-202ENST00000423102 261 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 AC009965.2-201ENST00000425328 970 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 ETF1P3-201ENST00000430422 1160 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 GTF2IP13-201ENST00000438487 386 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 AL157827.1-201ENST00000447622 132 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 OR51B8P-201ENST00000449892 769 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 MTCO3P10-201ENST00000455912 772 ntBASIC3.95□□□□□ -1.78
BHLHA9Q7RTU4 MTND1P16-201ENST00000465177 898 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms