Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 ERLEC1P1-201ENST00000433806 578 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 IFNA20P-201ENST00000436840 528 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AL138799.3-201ENST00000438968 350 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 SNORD97-201ENST00000459187 142 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 HMGB1P25-201ENST00000468402 607 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC007016.1-201ENST00000512110 244 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 HIGD1AP3-201ENST00000515857 278 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 RN7SKP122-201ENST00000515923 296 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 RN7SKP219-201ENST00000516825 296 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 RNU7-30P-201ENST00000516835 62 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 HMGB1P41-201ENST00000520234 440 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC103783.1-201ENST00000520506 373 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 PSMA3P-201ENST00000555485 635 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AC243960.4-201ENST00000600532 288 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RUFY4Q6ZNE9 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
RUFY4Q6ZNE9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RUFY4Q6ZNE9 ZNF137P-201ENST00000456718 1920 ntBASIC5.15□□□□□ -1.58
RUFY4Q6ZNE9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RUFY4Q6ZNE9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.15□□□□□ -1.58
RUFY4Q6ZNE9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RUFY4Q6ZNE9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RUFY4Q6ZNE9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-641P-201ENST00000384006 107 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-637P-201ENST00000384050 107 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 SNORD37.1-201ENST00000390968 65 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AL136372.1-201ENST00000403060 228 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 ARL5AP1-201ENST00000418991 388 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 MTCYBP8-201ENST00000422855 651 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 SAR1AP4-201ENST00000429225 591 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AL162591.2-201ENST00000449634 317 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 MTND3P16-201ENST00000452205 344 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC079804.1-201ENST00000461922 436 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC007547.1-201ENST00000462177 490 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 MRPS17P3-201ENST00000465453 385 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 RPL7L1P8-201ENST00000469911 741 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 RNU6-1314P-201ENST00000517139 104 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC100870.1-201ENST00000522035 505 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 CR383656.7-201ENST00000548164 174 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC078814.3-201ENST00000553036 491 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AP001429.1-201ENST00000602568 530 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC007687.1-201ENST00000602704 304 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC006254.3-201ENST00000603353 884 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AL031176.1-201ENST00000604554 466 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AL031666.3-201ENST00000609320 1006 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC090617.10-201ENST00000624308 134 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 ASNSP3-201ENST00000451989 1306 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 MTND4P35-201ENST00000604257 1375 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 AC000123.3-201ENST00000624029 4975 ntBASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
RUFY4Q6ZNE9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 ZFRP1-201ENST00000457579 2970 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 MTCO1P24-201ENST00000515438 1558 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 Y_RNA.431-201ENST00000384086 102 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AL109755.1-201ENST00000401791 649 ntBASIC5.14□□□□□ -1.59
RUFY4Q6ZNE9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 273.9 ms