Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 MIR331-201ENST00000362302 94 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 RNU1-64P-201ENST00000365443 163 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 MIR513A2-201ENST00000385249 127 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC110754.1-201ENST00000399740 601 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 RNA5SP317-201ENST00000410176 116 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 RNA5SP311-201ENST00000411290 116 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 USP9YP18-201ENST00000425912 695 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 RPS3AP14-201ENST00000483907 780 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 RNA5SP315-201ENST00000516340 116 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 RNA5SP312-201ENST00000517068 116 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 RNU6-840P-201ENST00000517275 65 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 SNRPGP16-201ENST00000533275 226 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 TRAV8-5-201ENST00000537369 341 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 RPL23AP84-201ENST00000571193 464 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AL591034.3-201ENST00000605511 685 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AF250324.2-201ENST00000608299 610 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC017083.3-201ENST00000609955 700 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AL355810.1-201ENST00000614629 552 ntBASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CCDC144BQ3MJ40 SDAD1P2-201ENST00000441308 2028 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 LINC00622-201ENST00000562811 1570 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC012020.1-201ENST00000624541 1728 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC073343.1-201ENST00000328239 651 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 DEFB108F-201ENST00000344638 222 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 Y_RNA.9-201ENST00000362354 101 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 RNA5SP22-201ENST00000365393 109 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 RNU1-13P-201ENST00000384499 162 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AL121834.1-202ENST00000404494 277 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AL139095.3-201ENST00000419672 1203 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 MTCYBP5-201ENST00000423752 1135 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 MED13P1-201ENST00000428342 171 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 HLA-N-201ENST00000437516 135 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 RPL23AP20-201ENST00000447965 421 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC006480.1-201ENST00000449887 378 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC091153.1-201ENST00000466297 402 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC108475.1-201ENST00000507880 950 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 SLC25A15P5-201ENST00000508033 253 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AF213884.2-201ENST00000510417 903 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 GMPSP1-201ENST00000514075 579 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AL359212.1-201ENST00000556608 614 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC093227.2-201ENST00000589357 285 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 GLUD1P4-201ENST00000590914 418 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC113403.1-201ENST00000604910 193 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AL136363.1-201ENST00000605349 337 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC090517.2-201ENST00000614966 680 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC005609.4-201ENST00000625071 447 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 MIR492-201ENST00000638676 116 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 AC010300.1-201ENST00000600671 5134 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 GABPAP-201ENST00000419271 1356 ntBASIC5.04□□□□□ -1.6
CCDC144BQ3MJ40 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 USP8P1-201ENST00000494673 3183 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 MAPK10-320ENST00000641462 6696 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms