Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC098799.2-201ENST00000509466 868 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.71□□□□□ -1.98
RFX4Q33E94 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RFX4Q33E94 OR4P1P-201ENST00000530808 1136 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX4Q33E94 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RFX4Q33E94 EEF1B2P4-201ENST00000551398 348 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX4Q33E94 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RFX4Q33E94 MTCYBP23-201ENST00000558717 1102 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.71□□□□□ -1.98
RFX4Q33E94 AC245036.5-201ENST00000596330 847 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AL355812.1-201ENST00000603215 216 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AL157392.4-201ENST00000609756 345 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.71□□□□□ -1.98
RFX4Q33E94 AC012314.7-201ENST00000619693 93 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 MIR6075-201ENST00000620782 95 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AP003122.6-201ENST00000623831 495 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.71□□□□□ -1.98
RFX4Q33E94 FAM35BP-202ENST00000497389 3337 ntBASIC2.71□□□□□ -1.98
RFX4Q33E94 AC244517.1-201ENST00000606030 2086 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RFX4Q33E94 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.7□□□□□ -1.98
RFX4Q33E94 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RFX4Q33E94 MIR22-201ENST00000362190 85 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 MIR23B-201ENST00000384832 97 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 MIR181A2-201ENST00000384863 110 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 MIR670-201ENST00000390142 98 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 RNA5SP80-201ENST00000410475 111 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 RNA5SP38-201ENST00000410750 119 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AL356320.2-201ENST00000417263 507 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX4Q33E94 AL353678.1-201ENST00000422735 741 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AC005326.1-201ENST00000429197 123 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX4Q33E94 AC004854.1-201ENST00000440356 349 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX4Q33E94 RPL39P6-201ENST00000448289 150 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AL009048.1-201ENST00000450437 298 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 OR6K1P-201ENST00000456766 971 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX4Q33E94 RPS15AP17-201ENST00000470598 390 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 RN7SL601P-201ENST00000471221 293 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFX4Q33E94 AC011979.1-201ENST00000472300 483 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 RPL32P34-201ENST00000486380 400 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX4Q33E94 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX4Q33E94 AC114322.1-201ENST00000506771 926 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX4Q33E94 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
RFX4Q33E94 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX4Q33E94 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.7□□□□□ -1.98
RFX4Q33E94 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.7□□□□□ -1.98
RFX4Q33E94 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX4Q33E94 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX4Q33E94 AL121603.1-201ENST00000553815 142 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.7□□□□□ -1.98
RFX4Q33E94 HIGD1AP17-201ENST00000554576 276 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFX4Q33E94 AC023813.2-201ENST00000564321 469 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 MIR5680-201ENST00000577577 84 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 MIR4429-201ENST00000580105 73 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RFX4Q33E94 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.7□□□□□ -1.98
RFX4Q33E94 AL390838.2-201ENST00000602394 274 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AL606834.2-201ENST00000602954 668 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AL035411.2-201ENST00000604022 421 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AC009220.3-201ENST00000604318 586 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.7□□□□□ -1.98
RFX4Q33E94 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RFX4Q33E94 MAPK10-266ENST00000641066 6555 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RFX4Q33E94 AC009487.2-201ENST00000420969 6821 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 AL049780.3-201ENST00000624612 1583 ntBASIC2.7□□□□□ -1.98
RFX4Q33E94 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RFX4Q33E94 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RFX4Q33E94 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.69□□□□□ -1.98
RFX4Q33E94 RNA5SP72-201ENST00000364442 117 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 RNA5SP267-201ENST00000364893 126 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 MTND4P13-201ENST00000402078 1023 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX4Q33E94 RPS3AP37-201ENST00000419176 745 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX4Q33E94 PSMA6P3-201ENST00000428242 164 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 YME1L1P1-201ENST00000429435 297 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AC091862.1-201ENST00000438016 1100 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 RPL23AP58-201ENST00000440453 469 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AL031313.1-201ENST00000448435 256 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 AL162389.1-201ENST00000449233 177 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 PRSS3P4-201ENST00000453323 162 ntBASIC2.69□□□□□ -1.98
RFX4Q33E94 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX4Q33E94 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.69□□□□□ -1.98
RFX4Q33E94 AC134050.1-201ENST00000495088 933 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms