Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SSRP1Q08945 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SSRP1Q08945 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SSRP1Q08945 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.98□□□□□ -1.61
SSRP1Q08945 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSRP1Q08945 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SSRP1Q08945 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SSRP1Q08945 OR52B1P-201ENST00000316506 909 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 Y_RNA.22-201ENST00000362492 102 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 RNU6-451P-201ENST00000362921 107 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 RNU6-606P-201ENST00000384721 111 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 RNU4-65P-201ENST00000410473 140 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 RPS7P15-201ENST00000415804 584 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.98□□□□□ -1.61
SSRP1Q08945 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.98□□□□□ -1.61
SSRP1Q08945 AL157831.1-201ENST00000426134 473 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.98□□□□□ -1.61
SSRP1Q08945 USP12PX-201ENST00000432383 1057 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.98□□□□□ -1.61
SSRP1Q08945 AL138799.3-201ENST00000438968 350 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.98□□□□□ -1.61
SSRP1Q08945 AL356010.1-201ENST00000456364 102 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.98□□□□□ -1.61
SSRP1Q08945 CEACAMP10-202ENST00000495431 496 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 AC025465.4-201ENST00000513422 638 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 AC026801.2-201ENST00000515352 425 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.98□□□□□ -1.61
SSRP1Q08945 AC126177.3-201ENST00000551839 688 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 HMGB3P26-201ENST00000560051 582 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 MIR5096-201ENST00000583713 70 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.98□□□□□ -1.61
SSRP1Q08945 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.98□□□□□ -1.61
SSRP1Q08945 AC063943.3-201ENST00000615562 356 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 AP005264.7-201ENST00000625003 745 ntBASIC4.98□□□□□ -1.61
SSRP1Q08945 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.98□□□□□ -1.61
SSRP1Q08945 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.97□□□□□ -1.61
SSRP1Q08945 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.97□□□□□ -1.61
SSRP1Q08945 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.97□□□□□ -1.61
SSRP1Q08945 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSRP1Q08945 RNU4-48P-201ENST00000365559 182 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSRP1Q08945 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
SSRP1Q08945 MIR135A2-201ENST00000384854 100 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AL583834.1-201ENST00000406943 343 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 RN7SKP159-201ENST00000410657 292 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 RNA5SP146-201ENST00000410743 123 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AC016397.1-201ENST00000412463 242 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.97□□□□□ -1.61
SSRP1Q08945 AC012498.1-201ENST00000424037 437 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 ZNF863P-201ENST00000426746 417 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 OR2AS1P-201ENST00000427827 319 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.97□□□□□ -1.61
SSRP1Q08945 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.97□□□□□ -1.61
SSRP1Q08945 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.97□□□□□ -1.61
SSRP1Q08945 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.97□□□□□ -1.61
SSRP1Q08945 RPL23AP81-201ENST00000455252 467 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AC007537.2-201ENST00000472093 511 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 RPS15AP36-201ENST00000492022 382 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AC093278.1-201ENST00000494700 600 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AC104164.2-201ENST00000496953 495 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 MTCYBP18-201ENST00000501056 747 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 PPBPP1-201ENST00000510807 373 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.97□□□□□ -1.61
SSRP1Q08945 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.97□□□□□ -1.61
SSRP1Q08945 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.97□□□□□ -1.61
SSRP1Q08945 TRAV8-5-201ENST00000537369 341 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 HIF1AP1-201ENST00000553642 175 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.97□□□□□ -1.61
SSRP1Q08945 AC055876.1-202ENST00000567053 138 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.97□□□□□ -1.61
SSRP1Q08945 MIR4293-201ENST00000584305 78 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 LARP7P1-201ENST00000605576 316 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AL031666.3-201ENST00000609320 1006 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 AC131238.1-201ENST00000617135 328 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.97□□□□□ -1.61
SSRP1Q08945 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.97□□□□□ -1.61
SSRP1Q08945 AC138649.5-201ENST00000637456 137 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.97□□□□□ -1.61
SSRP1Q08945 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.97□□□□□ -1.61
SSRP1Q08945 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSRP1Q08945 AL158163.1-201ENST00000603915 1649 ntBASIC4.97□□□□□ -1.61
SSRP1Q08945 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSRP1Q08945 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.96□□□□□ -1.61
SSRP1Q08945 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SSRP1Q08945 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SSRP1Q08945 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.96□□□□□ -1.61
SSRP1Q08945 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.96□□□□□ -1.61
SSRP1Q08945 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SSRP1Q08945 AL136372.1-201ENST00000403060 228 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 AL356776.1-201ENST00000406574 447 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 RNA5SP36-201ENST00000410197 133 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 RNA5SP118-201ENST00000410385 109 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 OR51A5P-201ENST00000415429 942 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 MTCO3P12-201ENST00000416718 547 ntBASIC4.96□□□□□ -1.62
SSRP1Q08945 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.96□□□□□ -1.62
SSRP1Q08945 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.96□□□□□ -1.62
SSRP1Q08945 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SSRP1Q08945 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.96□□□□□ -1.62
SSRP1Q08945 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.96□□□□□ -1.62
SSRP1Q08945 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms