Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCNA1P78396 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCNA1P78396 RNU6-251P-201ENST00000363235 104 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 MYL8P-204ENST00000431574 518 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 AL359385.1-201ENST00000456509 365 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 RPS3P1-201ENST00000456781 192 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 AC128713.1-201ENST00000471495 306 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 HSPE1P6-201ENST00000479457 291 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 AC009901.1-201ENST00000506703 541 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 POU5F1P7-201ENST00000508759 541 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 RNA5SP380-201ENST00000517190 98 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.13□□□□□ -1.91
CCNA1P78396 AADACP1-206ENST00000561502 1193 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.13□□□□□ -1.91
CCNA1P78396 AL133507.1-201ENST00000605269 557 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 HPVC1-201ENST00000629899 1198 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CCNA1P78396 AL163152.1-201ENST00000642001 374 ntBASIC3.13□□□□□ -1.91
CCNA1P78396 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCNA1P78396 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCNA1P78396 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
CCNA1P78396 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCNA1P78396 ZNF849P-201ENST00000594711 1566 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCNA1P78396 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
CCNA1P78396 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.12□□□□□ -1.91
CCNA1P78396 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CCNA1P78396 AL589826.1-201ENST00000340697 249 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 AL139039.1-201ENST00000401900 692 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 AL121882.1-201ENST00000422893 417 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.12□□□□□ -1.91
CCNA1P78396 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 Z96811.1-201ENST00000445880 108 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 AL050341.1-201ENST00000447743 313 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.12□□□□□ -1.91
CCNA1P78396 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.12□□□□□ -1.91
CCNA1P78396 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.12□□□□□ -1.91
CCNA1P78396 AC109471.1-201ENST00000511631 612 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 RNA5SP148-201ENST00000516527 94 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 AC068339.2-201ENST00000534395 618 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.12□□□□□ -1.91
CCNA1P78396 NBEAP1-201ENST00000554452 979 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.12□□□□□ -1.91
CCNA1P78396 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.12□□□□□ -1.91
CCNA1P78396 AC011260.1-201ENST00000578420 472 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 MIR3609-201ENST00000582661 80 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.12□□□□□ -1.91
CCNA1P78396 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCNA1P78396 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.12□□□□□ -1.91
CCNA1P78396 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.12□□□□□ -1.91
CCNA1P78396 AC002064.3-201ENST00000623448 346 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 CYP3A51P-201ENST00000633513 256 ntBASIC3.12□□□□□ -1.91
CCNA1P78396 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.12□□□□□ -1.91
CCNA1P78396 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCNA1P78396 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CCNA1P78396 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCNA1P78396 TAB3P1-202ENST00000452645 1634 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCNA1P78396 GABRG2-229ENST00000641017 3628 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 RNU6-792P-201ENST00000363490 107 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 SNORA70B-201ENST00000384210 135 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 RNU4-27P-201ENST00000410889 139 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.11□□□□□ -1.91
CCNA1P78396 AL357078.2-201ENST00000416486 427 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.11□□□□□ -1.91
CCNA1P78396 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.11□□□□□ -1.91
CCNA1P78396 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.11□□□□□ -1.91
CCNA1P78396 HMGN2P30-201ENST00000423237 256 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 FAM204CP-201ENST00000424489 642 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.11□□□□□ -1.91
CCNA1P78396 AC234064.1-201ENST00000436312 247 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.11□□□□□ -1.91
CCNA1P78396 MTCO1P48-201ENST00000448024 1096 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 MTND2P30-201ENST00000456663 382 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 AP003102.1-201ENST00000525638 661 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 AC008127.2-201ENST00000549925 1075 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.11□□□□□ -1.91
CCNA1P78396 MAGOH2P-202ENST00000584384 429 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.11□□□□□ -1.91
CCNA1P78396 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.11□□□□□ -1.91
CCNA1P78396 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.11□□□□□ -1.91
CCNA1P78396 AL022099.1-201ENST00000604551 712 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 AC090115.4-201ENST00000609970 188 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.11□□□□□ -1.91
CCNA1P78396 AC087241.4-201ENST00000612441 480 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 ASNSP3-201ENST00000451989 1306 ntBASIC3.11□□□□□ -1.91
CCNA1P78396 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCNA1P78396 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCNA1P78396 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCNA1P78396 RNU6-549P-201ENST00000384433 107 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 MIR1290-201ENST00000408735 78 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 RNU2-15P-201ENST00000410692 191 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 RPL7P30-201ENST00000420888 709 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.1□□□□□ -1.91
CCNA1P78396 AC234781.2-201ENST00000426370 994 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 RPL31P54-201ENST00000429803 370 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AL121890.1-201ENST00000435457 205 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 NDUFB4P6-201ENST00000436819 366 ntBASIC3.1□□□□□ -1.91
CCNA1P78396 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms