Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SNORA6-201ENST00000384033 151 ntBASIC1.79□□□□□ -2.12
LSM3P62310 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.79□□□□□ -2.12
LSM3P62310 AC019097.1-201ENST00000424783 735 ntBASIC1.79□□□□□ -2.12
LSM3P62310 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 AL451074.3-201ENST00000437709 472 ntBASIC1.79□□□□□ -2.12
LSM3P62310 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.79□□□□□ -2.12
LSM3P62310 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.79□□□□□ -2.12
LSM3P62310 PNPLA4P1-201ENST00000458328 305 ntBASIC1.79□□□□□ -2.12
LSM3P62310 RNU7-26P-201ENST00000458980 63 ntBASIC1.79□□□□□ -2.12
LSM3P62310 FTH1P2-201ENST00000466086 412 ntBASIC1.79□□□□□ -2.12
LSM3P62310 RPL23AP41-201ENST00000484754 458 ntBASIC1.79□□□□□ -2.12
LSM3P62310 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC1.79□□□□□ -2.12
LSM3P62310 RPS29P20-201ENST00000489592 171 ntBASIC1.79□□□□□ -2.12
LSM3P62310 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LSM3P62310 OR5H5P-201ENST00000503164 928 ntBASIC1.79□□□□□ -2.12
LSM3P62310 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.79□□□□□ -2.12
LSM3P62310 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.79□□□□□ -2.12
LSM3P62310 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.79□□□□□ -2.12
LSM3P62310 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.79□□□□□ -2.12
LSM3P62310 HMGB1P46-201ENST00000520062 610 ntBASIC1.79□□□□□ -2.12
LSM3P62310 OR5AQ1P-201ENST00000527596 927 ntBASIC1.79□□□□□ -2.12
LSM3P62310 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.79□□□□□ -2.12
LSM3P62310 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 GTF3AP2-201ENST00000557014 266 ntBASIC1.79□□□□□ -2.12
LSM3P62310 HMGB1P6-201ENST00000569046 646 ntBASIC1.79□□□□□ -2.12
LSM3P62310 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.79□□□□□ -2.12
LSM3P62310 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 SNRPGP19-201ENST00000603826 189 ntBASIC1.79□□□□□ -2.12
LSM3P62310 AL109618.2-201ENST00000605527 211 ntBASIC1.79□□□□□ -2.12
LSM3P62310 AC073111.2-201ENST00000605657 1075 ntBASIC1.79□□□□□ -2.12
LSM3P62310 AC090116.1-201ENST00000615679 446 ntBASIC1.79□□□□□ -2.12
LSM3P62310 AC104307.1-201ENST00000616142 196 ntBASIC1.79□□□□□ -2.12
LSM3P62310 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
LSM3P62310 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.79□□□□□ -2.12
LSM3P62310 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.79□□□□□ -2.12
LSM3P62310 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
LSM3P62310 AL512646.1-201ENST00000269395 1077 ntBASIC1.78□□□□□ -2.12
LSM3P62310 RNU1-52P-201ENST00000384190 164 ntBASIC1.78□□□□□ -2.12
LSM3P62310 U3.40-201ENST00000408706 208 ntBASIC1.78□□□□□ -2.12
LSM3P62310 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.78□□□□□ -2.12
LSM3P62310 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.78□□□□□ -2.12
LSM3P62310 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.78□□□□□ -2.12
LSM3P62310 AC063976.3-201ENST00000426849 329 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.78□□□□□ -2.12
LSM3P62310 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.78□□□□□ -2.12
LSM3P62310 WASF1P1-201ENST00000447560 1131 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.78□□□□□ -2.12
LSM3P62310 AC233982.1-201ENST00000451247 436 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AC011825.1-201ENST00000484967 388 ntBASIC1.78□□□□□ -2.12
LSM3P62310 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.78□□□□□ -2.12
LSM3P62310 MLLT10P2-201ENST00000506434 249 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AC114322.1-201ENST00000506771 926 ntBASIC1.78□□□□□ -2.12
LSM3P62310 SETP12-201ENST00000514068 805 ntBASIC1.78□□□□□ -2.12
LSM3P62310 TRAV28-201ENST00000557548 323 ntBASIC1.78□□□□□ -2.12
LSM3P62310 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.78□□□□□ -2.12
LSM3P62310 MED28P6-201ENST00000558776 231 ntBASIC1.78□□□□□ -2.12
LSM3P62310 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.78□□□□□ -2.12
LSM3P62310 FAM60BP-201ENST00000578364 658 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AL451007.1-201ENST00000595491 289 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AC012669.1-201ENST00000603209 283 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.78□□□□□ -2.12
LSM3P62310 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AC106028.5-201ENST00000610332 395 ntBASIC1.78□□□□□ -2.12
LSM3P62310 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.78□□□□□ -2.12
LSM3P62310 AL158801.5-201ENST00000623123 465 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AC034229.5-201ENST00000624258 185 ntBASIC1.78□□□□□ -2.12
LSM3P62310 AC068880.5-201ENST00000624331 290 ntBASIC1.78□□□□□ -2.12
LSM3P62310 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
LSM3P62310 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
LSM3P62310 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
LSM3P62310 ZNF519P1-201ENST00000449011 1626 ntBASIC1.77□□□□□ -2.13
LSM3P62310 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LSM3P62310 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
LSM3P62310 SSXP10-201ENST00000402595 565 ntBASIC1.77□□□□□ -2.13
LSM3P62310 RNU4-74P-201ENST00000411280 161 ntBASIC1.77□□□□□ -2.13
LSM3P62310 FO393419.3-201ENST00000428741 282 ntBASIC1.77□□□□□ -2.13
LSM3P62310 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.77□□□□□ -2.13
LSM3P62310 MTCYBP45-201ENST00000435243 565 ntBASIC1.77□□□□□ -2.13
LSM3P62310 UBE2V1P13-201ENST00000436983 439 ntBASIC1.77□□□□□ -2.13
LSM3P62310 AL445687.1-201ENST00000439946 251 ntBASIC1.77□□□□□ -2.13
LSM3P62310 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.77□□□□□ -2.13
LSM3P62310 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.77□□□□□ -2.13
LSM3P62310 PPP1R2P5-201ENST00000457256 603 ntBASIC1.77□□□□□ -2.13
LSM3P62310 AC078857.1-201ENST00000469870 667 ntBASIC1.77□□□□□ -2.13
LSM3P62310 MTCO2P9-201ENST00000503214 694 ntBASIC1.77□□□□□ -2.13
LSM3P62310 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.77□□□□□ -2.13
LSM3P62310 AC016550.3-201ENST00000515706 767 ntBASIC1.77□□□□□ -2.13
LSM3P62310 MIR514B-201ENST00000516774 80 ntBASIC1.77□□□□□ -2.13
LSM3P62310 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.77□□□□□ -2.13
LSM3P62310 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.77□□□□□ -2.13
LSM3P62310 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.77□□□□□ -2.13
LSM3P62310 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.77□□□□□ -2.13
LSM3P62310 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms