Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 DEFB131D-201ENST00000526803 184 ntBASIC3.23□□□□□ -1.89
SRP54P61011 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.23□□□□□ -1.89
SRP54P61011 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.23□□□□□ -1.89
SRP54P61011 RPL21P12-201ENST00000559810 515 ntBASIC3.23□□□□□ -1.89
SRP54P61011 AC023813.2-201ENST00000564321 469 ntBASIC3.23□□□□□ -1.89
SRP54P61011 AC034268.2-201ENST00000571784 482 ntBASIC3.23□□□□□ -1.89
SRP54P61011 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.23□□□□□ -1.89
SRP54P61011 OR4K8P-201ENST00000578842 1048 ntBASIC3.23□□□□□ -1.89
SRP54P61011 RPP40P2-201ENST00000603596 712 ntBASIC3.23□□□□□ -1.89
SRP54P61011 DUXAP3-201ENST00000603616 594 ntBASIC3.23□□□□□ -1.89
SRP54P61011 MTND3P19-201ENST00000603825 345 ntBASIC3.23□□□□□ -1.89
SRP54P61011 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.23□□□□□ -1.89
SRP54P61011 AP002826.1-201ENST00000608835 315 ntBASIC3.23□□□□□ -1.89
SRP54P61011 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.23□□□□□ -1.89
SRP54P61011 AC110801.1-201ENST00000623590 212 ntBASIC3.23□□□□□ -1.89
SRP54P61011 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
SRP54P61011 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SRP54P61011 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.23□□□□□ -1.89
SRP54P61011 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SRP54P61011 CUL1P1-201ENST00000509510 2425 ntBASIC3.23□□□□□ -1.89
SRP54P61011 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
SRP54P61011 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SRP54P61011 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SRP54P61011 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SRP54P61011 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SRP54P61011 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.22□□□□□ -1.89
SRP54P61011 RNA5SP374-201ENST00000362939 125 ntBASIC3.22□□□□□ -1.89
SRP54P61011 RPS3AP26-201ENST00000398259 784 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AL031121.1-201ENST00000406553 254 ntBASIC3.22□□□□□ -1.89
SRP54P61011 RNA5SP31-201ENST00000411144 127 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AL356968.1-201ENST00000416622 474 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AC092648.1-201ENST00000425870 423 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.22□□□□□ -1.89
SRP54P61011 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.22□□□□□ -1.89
SRP54P61011 USP9YP24-201ENST00000434374 697 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AC024082.2-201ENST00000434771 238 ntBASIC3.22□□□□□ -1.89
SRP54P61011 USP9YP17-201ENST00000444617 696 ntBASIC3.22□□□□□ -1.89
SRP54P61011 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.22□□□□□ -1.89
SRP54P61011 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.22□□□□□ -1.89
SRP54P61011 RPL21P134-201ENST00000453468 483 ntBASIC3.22□□□□□ -1.89
SRP54P61011 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.22□□□□□ -1.89
SRP54P61011 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.22□□□□□ -1.89
SRP54P61011 RNA5SP310-201ENST00000459084 116 ntBASIC3.22□□□□□ -1.89
SRP54P61011 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.22□□□□□ -1.89
SRP54P61011 HMGN2P13-201ENST00000476476 274 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AC109925.1-201ENST00000478069 331 ntBASIC3.22□□□□□ -1.89
SRP54P61011 VN1R104P-201ENST00000505115 1009 ntBASIC3.22□□□□□ -1.89
SRP54P61011 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.22□□□□□ -1.89
SRP54P61011 AC093677.1-201ENST00000514414 678 ntBASIC3.22□□□□□ -1.89
SRP54P61011 SNORA70.16-201ENST00000516390 95 ntBASIC3.22□□□□□ -1.89
SRP54P61011 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.22□□□□□ -1.89
SRP54P61011 AC004024.1-201ENST00000549244 247 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.22□□□□□ -1.89
SRP54P61011 AC009712.1-201ENST00000564938 316 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AC055876.1-202ENST00000567053 138 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.22□□□□□ -1.89
SRP54P61011 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.22□□□□□ -1.89
SRP54P61011 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.22□□□□□ -1.89
SRP54P61011 RNU4-5P-201ENST00000607255 135 ntBASIC3.22□□□□□ -1.89
SRP54P61011 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.22□□□□□ -1.89
SRP54P61011 AC131235.4-201ENST00000609288 620 ntBASIC3.22□□□□□ -1.89
SRP54P61011 uc_338.1-201ENST00000612113 180 ntBASIC3.22□□□□□ -1.89
SRP54P61011 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SRP54P61011 SNORD39.4-201ENST00000620099 78 ntBASIC3.22□□□□□ -1.89
SRP54P61011 AC011330.2-201ENST00000621680 635 ntBASIC3.22□□□□□ -1.89
SRP54P61011 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.22□□□□□ -1.89
SRP54P61011 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SRP54P61011 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SRP54P61011 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
SRP54P61011 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.22□□□□□ -1.89
SRP54P61011 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
SRP54P61011 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.21□□□□□ -1.89
SRP54P61011 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.21□□□□□ -1.89
SRP54P61011 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SRP54P61011 AL022578.1-201ENST00000439330 1433 ntBASIC3.21□□□□□ -1.9
SRP54P61011 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SRP54P61011 DEFB108F-201ENST00000344638 222 ntBASIC3.21□□□□□ -1.9
SRP54P61011 RNU1-70P-201ENST00000362618 164 ntBASIC3.21□□□□□ -1.9
SRP54P61011 Y_RNA.192-201ENST00000363977 102 ntBASIC3.21□□□□□ -1.9
SRP54P61011 SNORD116.1-201ENST00000365628 92 ntBASIC3.21□□□□□ -1.9
SRP54P61011 MIR128-1-201ENST00000384921 82 ntBASIC3.21□□□□□ -1.9
SRP54P61011 MIR493-201ENST00000385254 89 ntBASIC3.21□□□□□ -1.9
SRP54P61011 RPL23AP29-201ENST00000397284 453 ntBASIC3.21□□□□□ -1.9
SRP54P61011 FAT1P1-201ENST00000406588 507 ntBASIC3.21□□□□□ -1.9
SRP54P61011 MIR1284-201ENST00000408337 120 ntBASIC3.21□□□□□ -1.9
SRP54P61011 RN7SKP123-201ENST00000410732 291 ntBASIC3.21□□□□□ -1.9
SRP54P61011 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
SRP54P61011 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SRP54P61011 AC106883.1-201ENST00000418805 562 ntBASIC3.21□□□□□ -1.9
SRP54P61011 AL139421.1-201ENST00000423010 169 ntBASIC3.21□□□□□ -1.9
SRP54P61011 NANOGP5-201ENST00000424456 877 ntBASIC3.21□□□□□ -1.9
SRP54P61011 USP9YP36-201ENST00000424581 829 ntBASIC3.21□□□□□ -1.9
SRP54P61011 RPL7P46-201ENST00000425129 740 ntBASIC3.21□□□□□ -1.9
SRP54P61011 RPL23AP82-202ENST00000427528 469 ntBASIC3.21□□□□□ -1.9
SRP54P61011 MTATP6P4-201ENST00000427725 675 ntBASIC3.21□□□□□ -1.9
SRP54P61011 ATP5F1P1-201ENST00000433775 569 ntBASIC3.21□□□□□ -1.9
SRP54P61011 FTH1P1-201ENST00000437933 532 ntBASIC3.21□□□□□ -1.9
SRP54P61011 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.21□□□□□ -1.9
SRP54P61011 AC104308.1-201ENST00000454621 333 ntBASIC3.21□□□□□ -1.9
SRP54P61011 RPS4XP2-201ENST00000458402 793 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms