Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC019278.1-201ENST00000623516 479 ntBASIC4.39□□□□□ -1.71
WNT3AP56704 AC090617.10-201ENST00000624308 134 ntBASIC4.39□□□□□ -1.71
WNT3AP56704 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
WNT3AP56704 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.39□□□□□ -1.71
WNT3AP56704 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
WNT3AP56704 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
WNT3AP56704 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
WNT3AP56704 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
WNT3AP56704 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.39□□□□□ -1.71
WNT3AP56704 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
WNT3AP56704 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
WNT3AP56704 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
WNT3AP56704 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 PABPC1P7-201ENST00000413177 1513 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 MTCO1P9-201ENST00000505577 1534 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
WNT3AP56704 RNU1-15P-201ENST00000353977 144 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 RNA5SP447-201ENST00000363749 119 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 RNU4-48P-201ENST00000365559 182 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AC019155.1-201ENST00000382242 574 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 RNU6-332P-201ENST00000391193 108 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.38□□□□□ -1.71
WNT3AP56704 AL136116.1-201ENST00000403591 381 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 RNU4-78P-201ENST00000410940 126 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 RN7SKP216-201ENST00000411050 312 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 RNU6-516P-201ENST00000411381 104 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 RPS20P15-201ENST00000412792 311 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 EEF1A1P40-201ENST00000412883 573 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AC092447.6-201ENST00000414578 210 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.38□□□□□ -1.71
WNT3AP56704 AL132765.1-201ENST00000434165 553 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 RPL23AP52-201ENST00000439311 478 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AC007677.1-201ENST00000445757 515 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 DDX3P2-201ENST00000446138 111 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 TPT1P13-201ENST00000449760 499 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.38□□□□□ -1.71
WNT3AP56704 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 RN7SL98P-201ENST00000462271 300 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 AL163973.1-201ENST00000484753 577 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 NIP7P2-201ENST00000485801 544 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 RN7SL810P-201ENST00000493031 276 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
WNT3AP56704 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.38□□□□□ -1.71
WNT3AP56704 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.38□□□□□ -1.71
WNT3AP56704 AC026427.2-201ENST00000506228 536 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.38□□□□□ -1.71
WNT3AP56704 RNU7-51P-201ENST00000516560 62 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 SNORD60.2-201ENST00000516883 86 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 CDH12P4-201ENST00000517835 295 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 CDH12P3-201ENST00000517935 295 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 CDH12P1-201ENST00000518435 295 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.38□□□□□ -1.71
WNT3AP56704 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 AC103843.2-201ENST00000530523 682 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 OR5B10P-201ENST00000532869 642 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.38□□□□□ -1.71
WNT3AP56704 SETP7-201ENST00000552169 453 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.38□□□□□ -1.71
WNT3AP56704 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.38□□□□□ -1.71
WNT3AP56704 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.38□□□□□ -1.71
WNT3AP56704 AL133153.1-201ENST00000557756 303 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AC037471.2-201ENST00000564941 598 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 HNRNPCP4-201ENST00000571636 900 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.38□□□□□ -1.71
WNT3AP56704 MIR4330-201ENST00000579077 105 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.38□□□□□ -1.71
WNT3AP56704 AC243960.4-201ENST00000600532 288 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AL354984.3-201ENST00000604803 325 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
WNT3AP56704 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
WNT3AP56704 OR4G1P-203ENST00000641984 1631 ntBASIC4.38□□□□□ -1.71
WNT3AP56704 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.38□□□□□ -1.71
WNT3AP56704 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
WNT3AP56704 AL592437.2-201ENST00000421655 2434 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
WNT3AP56704 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
WNT3AP56704 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.37□□□□□ -1.71
WNT3AP56704 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
WNT3AP56704 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
WNT3AP56704 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
WNT3AP56704 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
WNT3AP56704 Y_RNA.58-201ENST00000362807 102 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 Y_RNA.154-201ENST00000363624 102 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 SNORA62.1-201ENST00000364287 154 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 RNY3P1-201ENST00000365085 102 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 RNY3-201ENST00000365484 102 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 RNU6-432P-201ENST00000384196 109 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 Y_RNA.490-201ENST00000384413 102 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 RNU6-606P-201ENST00000384721 111 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 MIR558-201ENST00000384920 94 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 RNU6-821P-201ENST00000390995 107 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 AL583835.1-201ENST00000399570 407 ntBASIC4.37□□□□□ -1.71
WNT3AP56704 FAT1P1-201ENST00000406588 507 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms