Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZNF705CP-201ENST00000530515 889 ntBASIC3.36□□□□□ -1.87
VCPP55072 AC091544.4-201ENST00000555268 342 ntBASIC3.36□□□□□ -1.87
VCPP55072 SULT1C2P1-202ENST00000562418 459 ntBASIC3.36□□□□□ -1.87
VCPP55072 RPP40P2-201ENST00000603596 712 ntBASIC3.36□□□□□ -1.87
VCPP55072 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.36□□□□□ -1.87
VCPP55072 RNU4-5P-201ENST00000607255 135 ntBASIC3.36□□□□□ -1.87
VCPP55072 AC024257.5-201ENST00000612739 531 ntBASIC3.36□□□□□ -1.87
VCPP55072 AC091903.1-201ENST00000624322 454 ntBASIC3.36□□□□□ -1.87
VCPP55072 AC010149.2-201ENST00000637608 315 ntBASIC3.36□□□□□ -1.87
VCPP55072 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VCPP55072 AC130650.2-201ENST00000618736 2403 ntBASIC3.35□□□□□ -1.87
VCPP55072 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VCPP55072 AC103988.1-201ENST00000566382 2177 ntBASIC3.35□□□□□ -1.87
VCPP55072 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
VCPP55072 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VCPP55072 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VCPP55072 ZNF29P-201ENST00000225587 168 ntBASIC3.35□□□□□ -1.87
VCPP55072 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
VCPP55072 AL136310.1-201ENST00000404926 654 ntBASIC3.35□□□□□ -1.87
VCPP55072 MTATP6P20-201ENST00000414147 562 ntBASIC3.35□□□□□ -1.87
VCPP55072 LUZP4P1-201ENST00000415420 344 ntBASIC3.35□□□□□ -1.87
VCPP55072 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 NANOGP2-201ENST00000435391 727 ntBASIC3.35□□□□□ -1.87
VCPP55072 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.35□□□□□ -1.87
VCPP55072 AL589880.1-201ENST00000448271 287 ntBASIC3.35□□□□□ -1.87
VCPP55072 AL009048.1-201ENST00000450437 298 ntBASIC3.35□□□□□ -1.87
VCPP55072 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.35□□□□□ -1.87
VCPP55072 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 TRBV12-1-201ENST00000479785 344 ntBASIC3.35□□□□□ -1.87
VCPP55072 AC013828.1-201ENST00000481845 158 ntBASIC3.35□□□□□ -1.87
VCPP55072 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.35□□□□□ -1.87
VCPP55072 KCTD9P5-201ENST00000504141 1170 ntBASIC3.35□□□□□ -1.87
VCPP55072 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 AC017037.2-201ENST00000513850 890 ntBASIC3.35□□□□□ -1.87
VCPP55072 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.35□□□□□ -1.87
VCPP55072 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.35□□□□□ -1.87
VCPP55072 AC090502.2-201ENST00000549267 280 ntBASIC3.35□□□□□ -1.87
VCPP55072 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VCPP55072 MTND1P8-201ENST00000571424 950 ntBASIC3.35□□□□□ -1.87
VCPP55072 COX6CP3-201ENST00000580869 223 ntBASIC3.35□□□□□ -1.87
VCPP55072 AC015688.2-201ENST00000584523 262 ntBASIC3.35□□□□□ -1.87
VCPP55072 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 MTCO2P2-201ENST00000591258 225 ntBASIC3.35□□□□□ -1.87
VCPP55072 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.35□□□□□ -1.87
VCPP55072 AC008962.1-201ENST00000605729 304 ntBASIC3.35□□□□□ -1.87
VCPP55072 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 AL157817.1-201ENST00000614264 790 ntBASIC3.35□□□□□ -1.87
VCPP55072 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.35□□□□□ -1.87
VCPP55072 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.35□□□□□ -1.87
VCPP55072 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.35□□□□□ -1.87
VCPP55072 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.35□□□□□ -1.87
VCPP55072 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.35□□□□□ -1.87
VCPP55072 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.34□□□□□ -1.87
VCPP55072 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
VCPP55072 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.34□□□□□ -1.87
VCPP55072 U3.6-201ENST00000363622 211 ntBASIC3.34□□□□□ -1.87
VCPP55072 RNU6-730P-201ENST00000383954 104 ntBASIC3.34□□□□□ -1.87
VCPP55072 RNU4-22P-201ENST00000411058 166 ntBASIC3.34□□□□□ -1.87
VCPP55072 RPL32P35-201ENST00000415214 394 ntBASIC3.34□□□□□ -1.87
VCPP55072 RPS3AP37-201ENST00000419176 745 ntBASIC3.34□□□□□ -1.87
VCPP55072 UBE2D3P2-201ENST00000424409 445 ntBASIC3.34□□□□□ -1.87
VCPP55072 NANOGP5-201ENST00000424456 877 ntBASIC3.34□□□□□ -1.87
VCPP55072 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.34□□□□□ -1.87
VCPP55072 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.34□□□□□ -1.87
VCPP55072 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.34□□□□□ -1.87
VCPP55072 MTCO1P48-201ENST00000448024 1096 ntBASIC3.34□□□□□ -1.87
VCPP55072 RPL36AP33-201ENST00000450395 310 ntBASIC3.34□□□□□ -1.87
VCPP55072 ZNF886P-201ENST00000450781 723 ntBASIC3.34□□□□□ -1.87
VCPP55072 ST13P14-201ENST00000474095 734 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC068724.1-201ENST00000487100 792 ntBASIC3.34□□□□□ -1.87
VCPP55072 KLRA1P-201ENST00000503499 986 ntBASIC3.34□□□□□ -1.87
VCPP55072 MTCYBP16-201ENST00000509187 1129 ntBASIC3.34□□□□□ -1.87
VCPP55072 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VCPP55072 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.34□□□□□ -1.87
VCPP55072 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC126177.3-201ENST00000551839 688 ntBASIC3.34□□□□□ -1.87
VCPP55072 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.34□□□□□ -1.87
VCPP55072 AL049838.1-201ENST00000563647 981 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.34□□□□□ -1.87
VCPP55072 AC138915.2-201ENST00000569776 97 ntBASIC3.34□□□□□ -1.87
VCPP55072 MIR4769-201ENST00000584126 77 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.34□□□□□ -1.87
VCPP55072 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.34□□□□□ -1.87
VCPP55072 AL035411.2-201ENST00000604022 421 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC021749.1-201ENST00000604322 607 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC091946.2-201ENST00000606105 291 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC006329.2-201ENST00000611491 394 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC100793.4-201ENST00000613683 429 ntBASIC3.34□□□□□ -1.87
VCPP55072 AC023158.2-201ENST00000614876 543 ntBASIC3.34□□□□□ -1.87
VCPP55072 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.34□□□□□ -1.87
VCPP55072 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.34□□□□□ -1.87
VCPP55072 AL360181.4-201ENST00000621752 134 ntBASIC3.34□□□□□ -1.87
VCPP55072 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.34□□□□□ -1.87
VCPP55072 MKKS-204ENST00000639674 192 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms