Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 RNU6-989P-201ENST00000362756 107 ntBASIC5.03□□□□□ -1.6
PMS1P54277 Y_RNA.138-201ENST00000363462 102 ntBASIC5.03□□□□□ -1.6
PMS1P54277 RNU5E-6P-201ENST00000365574 115 ntBASIC5.03□□□□□ -1.6
PMS1P54277 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PMS1P54277 RNU6-821P-201ENST00000390995 107 ntBASIC5.03□□□□□ -1.6
PMS1P54277 RN7SKP267-201ENST00000410381 285 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.03□□□□□ -1.6
PMS1P54277 AL590762.4-201ENST00000425885 253 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.03□□□□□ -1.6
PMS1P54277 RPL36AP6-201ENST00000435770 321 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC016831.4-201ENST00000438302 307 ntBASIC5.03□□□□□ -1.6
PMS1P54277 MTCYBP6-201ENST00000441810 138 ntBASIC5.03□□□□□ -1.6
PMS1P54277 RPL21P133-201ENST00000443666 476 ntBASIC5.03□□□□□ -1.6
PMS1P54277 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.03□□□□□ -1.6
PMS1P54277 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC010655.1-201ENST00000449336 292 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.03□□□□□ -1.6
PMS1P54277 AL118520.1-201ENST00000450770 291 ntBASIC5.03□□□□□ -1.6
PMS1P54277 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 AL162395.1-201ENST00000457882 422 ntBASIC5.03□□□□□ -1.6
PMS1P54277 SNORD97-201ENST00000459187 142 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC018638.3-201ENST00000461273 132 ntBASIC5.03□□□□□ -1.6
PMS1P54277 RPL37P6-202ENST00000464216 403 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.03□□□□□ -1.6
PMS1P54277 NDUFB5P1-201ENST00000508134 564 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.03□□□□□ -1.6
PMS1P54277 FAM206BP-201ENST00000510179 541 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.03□□□□□ -1.6
PMS1P54277 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.03□□□□□ -1.6
PMS1P54277 AP005597.4-201ENST00000526762 229 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.03□□□□□ -1.6
PMS1P54277 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.03□□□□□ -1.6
PMS1P54277 CR383656.7-201ENST00000548164 174 ntBASIC5.03□□□□□ -1.6
PMS1P54277 RPL21P7-201ENST00000557463 483 ntBASIC5.03□□□□□ -1.6
PMS1P54277 HMGB3P26-201ENST00000560051 582 ntBASIC5.03□□□□□ -1.6
PMS1P54277 MIR4436B2-201ENST00000581415 91 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.03□□□□□ -1.6
PMS1P54277 MIR4436B1-201ENST00000583272 91 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AL022099.1-201ENST00000604551 712 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.03□□□□□ -1.6
PMS1P54277 AL365204.3-201ENST00000612448 685 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC093838.1-201ENST00000613014 469 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC025034.2-201ENST00000623264 286 ntBASIC5.03□□□□□ -1.6
PMS1P54277 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.03□□□□□ -1.6
PMS1P54277 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.03□□□□□ -1.6
PMS1P54277 U3.53-201ENST00000628922 216 ntBASIC5.03□□□□□ -1.6
PMS1P54277 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PMS1P54277 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PMS1P54277 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.03□□□□□ -1.6
PMS1P54277 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PMS1P54277 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 AL049555.1-201ENST00000562834 1933 ntBASIC5.02□□□□□ -1.61
PMS1P54277 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.02□□□□□ -1.61
PMS1P54277 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.02□□□□□ -1.61
PMS1P54277 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PMS1P54277 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 AL109755.1-201ENST00000401791 649 ntBASIC5.02□□□□□ -1.61
PMS1P54277 AL645733.1-201ENST00000402250 217 ntBASIC5.02□□□□□ -1.61
PMS1P54277 LYPLA1P1-201ENST00000434514 622 ntBASIC5.02□□□□□ -1.61
PMS1P54277 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.02□□□□□ -1.61
PMS1P54277 AC234775.1-201ENST00000454247 670 ntBASIC5.02□□□□□ -1.61
PMS1P54277 AC091685.2-201ENST00000454924 864 ntBASIC5.02□□□□□ -1.61
PMS1P54277 RNU7-180P-201ENST00000459240 63 ntBASIC5.02□□□□□ -1.61
PMS1P54277 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 AC021146.3-201ENST00000511911 260 ntBASIC5.02□□□□□ -1.61
PMS1P54277 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.02□□□□□ -1.61
PMS1P54277 MTND4P7-201ENST00000523876 130 ntBASIC5.02□□□□□ -1.61
PMS1P54277 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.02□□□□□ -1.61
PMS1P54277 AP005639.2-201ENST00000527592 928 ntBASIC5.02□□□□□ -1.61
PMS1P54277 DEFB108D-201ENST00000527787 222 ntBASIC5.02□□□□□ -1.61
PMS1P54277 AP000676.2-201ENST00000529711 301 ntBASIC5.02□□□□□ -1.61
PMS1P54277 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.02□□□□□ -1.61
PMS1P54277 MIR3934-201ENST00000579806 107 ntBASIC5.02□□□□□ -1.61
PMS1P54277 AC091178.1-203ENST00000584586 279 ntBASIC5.02□□□□□ -1.61
PMS1P54277 MIR4424-201ENST00000585257 86 ntBASIC5.02□□□□□ -1.61
PMS1P54277 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.02□□□□□ -1.61
PMS1P54277 AC010201.1-201ENST00000605051 540 ntBASIC5.02□□□□□ -1.61
PMS1P54277 uc_338.34-201ENST00000617467 174 ntBASIC5.02□□□□□ -1.61
PMS1P54277 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.02□□□□□ -1.61
PMS1P54277 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PMS1P54277 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PMS1P54277 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.02□□□□□ -1.61
PMS1P54277 BDP1P-201ENST00000582658 1990 ntBASIC5.02□□□□□ -1.61
PMS1P54277 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PMS1P54277 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PMS1P54277 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.01□□□□□ -1.61
PMS1P54277 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PMS1P54277 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PMS1P54277 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms