Protein–RNA interactions for Protein: P53609

PGGT1B, Geranylgeranyl transferase type-1 subunit beta, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1BP53609 RN7SL93P-201ENST00000463035 293 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.77□□□□□ -1.81
PGGT1BP53609 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.77□□□□□ -1.81
PGGT1BP53609 SAP18P1-201ENST00000512058 390 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.77□□□□□ -1.81
PGGT1BP53609 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.77□□□□□ -1.81
PGGT1BP53609 COX6CP8-201ENST00000522620 226 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 MTND1P35-201ENST00000526739 508 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 AP001646.1-201ENST00000527936 915 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PGGT1BP53609 CBX3P7-201ENST00000532876 502 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.77□□□□□ -1.81
PGGT1BP53609 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.77□□□□□ -1.81
PGGT1BP53609 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.77□□□□□ -1.81
PGGT1BP53609 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.77□□□□□ -1.81
PGGT1BP53609 AC063943.3-201ENST00000615562 356 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 AC099669.2-201ENST00000616549 437 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PGGT1BP53609 FP236240.3-201ENST00000623061 327 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 PISRT1-201ENST00000626175 531 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.77□□□□□ -1.81
PGGT1BP53609 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PGGT1BP53609 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PGGT1BP53609 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PGGT1BP53609 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PGGT1BP53609 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PGGT1BP53609 AC018529.3-201ENST00000624212 2254 ntBASIC3.77□□□□□ -1.81
PGGT1BP53609 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.77□□□□□ -1.81
PGGT1BP53609 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PGGT1BP53609 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PGGT1BP53609 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AC027287.1-201ENST00000553115 1453 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PGGT1BP53609 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
PGGT1BP53609 Y_RNA.1-201ENST00000352915 104 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 Y_RNA.46-201ENST00000362695 102 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 RNU6-1243P-201ENST00000364028 107 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 Y_RNA.295-201ENST00000364918 102 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 RNU6-282P-201ENST00000365357 103 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 RNU6-744P-201ENST00000365557 107 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 Y_RNA.381-201ENST00000365666 102 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 RNU6-483P-201ENST00000384088 108 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 RNU6-1316P-201ENST00000384242 108 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 RNU6-114P-201ENST00000384704 105 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 MIR199A2-201ENST00000385289 110 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 HLFP1-201ENST00000402375 499 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 BTBD10P2-201ENST00000404779 676 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 MIR1250-201ENST00000408098 113 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PGGT1BP53609 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 RPL21P109-201ENST00000422213 475 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PGGT1BP53609 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.76□□□□□ -1.81
PGGT1BP53609 OR4F13P-201ENST00000428478 931 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AC104850.1-201ENST00000435940 476 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AC112653.1-201ENST00000443851 386 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 ARPC3P5-201ENST00000448802 534 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AL121877.1-201ENST00000453704 622 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AL359385.1-201ENST00000456509 365 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.76□□□□□ -1.81
PGGT1BP53609 RPL21P103-201ENST00000479921 488 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AC005726.1-201ENST00000494679 427 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AC090453.1-201ENST00000495560 436 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.76□□□□□ -1.81
PGGT1BP53609 Y_RNA.672-201ENST00000516289 104 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 RNU6-528P-201ENST00000516926 100 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 NARSP2-201ENST00000518524 679 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.76□□□□□ -1.81
PGGT1BP53609 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PGGT1BP53609 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AC008011.1-201ENST00000545989 227 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AC107016.1-201ENST00000550463 337 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 HMGB1P33-201ENST00000563485 527 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AC007566.2-201ENST00000603642 413 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 TUG1_1.1-201ENST00000610654 145 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AC025253.1-201ENST00000613623 543 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AC068722.2-201ENST00000618734 544 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 RMST_9.1-201ENST00000619945 193 ntBASIC3.76□□□□□ -1.81
PGGT1BP53609 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.76□□□□□ -1.81
PGGT1BP53609 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.76□□□□□ -1.81
PGGT1BP53609 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PGGT1BP53609 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.76□□□□□ -1.81
PGGT1BP53609 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.76□□□□□ -1.81
PGGT1BP53609 AL354685.2-201ENST00000448218 1447 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms