Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR4303-201ENST00000581299 66 ntBASIC2.31□□□□□ -2.04
NUP98P52948 ZNF92P3-201ENST00000596594 954 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AC009220.3-201ENST00000604318 586 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AC113194.1-201ENST00000606037 500 ntBASIC2.31□□□□□ -2.04
NUP98P52948 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.31□□□□□ -2.04
NUP98P52948 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
NUP98P52948 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUP98P52948 AL512283.1-201ENST00000606756 1384 ntBASIC2.31□□□□□ -2.04
NUP98P52948 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUP98P52948 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUP98P52948 RNU6-629P-201ENST00000384061 103 ntBASIC2.31□□□□□ -2.04
NUP98P52948 RNU1-101P-201ENST00000391171 127 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AC005517.2-201ENST00000424673 553 ntBASIC2.31□□□□□ -2.04
NUP98P52948 NDUFA5P10-201ENST00000432147 357 ntBASIC2.31□□□□□ -2.04
NUP98P52948 ARPC3P2-201ENST00000457786 533 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP98P52948 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.31□□□□□ -2.04
NUP98P52948 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP98P52948 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.31□□□□□ -2.04
NUP98P52948 AP003717.3-201ENST00000544832 1180 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AC090616.5-202ENST00000582111 297 ntBASIC2.31□□□□□ -2.04
NUP98P52948 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.31□□□□□ -2.04
NUP98P52948 MAGOH2P-202ENST00000584384 429 ntBASIC2.31□□□□□ -2.04
NUP98P52948 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.31□□□□□ -2.04
NUP98P52948 AC092954.1-201ENST00000609121 445 ntBASIC2.31□□□□□ -2.04
NUP98P52948 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NUP98P52948 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUP98P52948 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.3□□□□□ -2.04
NUP98P52948 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NUP98P52948 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.3□□□□□ -2.04
NUP98P52948 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NUP98P52948 RNU6-600P-201ENST00000362524 99 ntBASIC2.3□□□□□ -2.04
NUP98P52948 AL138880.1-201ENST00000405824 642 ntBASIC2.3□□□□□ -2.04
NUP98P52948 RNU2-20P-201ENST00000410425 191 ntBASIC2.3□□□□□ -2.04
NUP98P52948 AC004022.2-201ENST00000413824 193 ntBASIC2.3□□□□□ -2.04
NUP98P52948 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.3□□□□□ -2.04
NUP98P52948 OR51AB1P-201ENST00000429046 620 ntBASIC2.3□□□□□ -2.04
NUP98P52948 XKRY2-201ENST00000442362 1093 ntBASIC2.3□□□□□ -2.04
NUP98P52948 AC025033.1-201ENST00000463883 194 ntBASIC2.3□□□□□ -2.04
NUP98P52948 RPL7P5-201ENST00000471472 736 ntBASIC2.3□□□□□ -2.04
NUP98P52948 AC111193.1-201ENST00000504097 155 ntBASIC2.3□□□□□ -2.04
NUP98P52948 RNA5SP182-201ENST00000516064 82 ntBASIC2.3□□□□□ -2.04
NUP98P52948 RNU6-1004P-201ENST00000516584 111 ntBASIC2.3□□□□□ -2.04
NUP98P52948 RN7SKP96-201ENST00000516948 297 ntBASIC2.3□□□□□ -2.04
NUP98P52948 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.3□□□□□ -2.04
NUP98P52948 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.3□□□□□ -2.04
NUP98P52948 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.3□□□□□ -2.04
NUP98P52948 AC124283.4-201ENST00000581815 456 ntBASIC2.3□□□□□ -2.04
NUP98P52948 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.3□□□□□ -2.04
NUP98P52948 AC016877.3-201ENST00000606778 504 ntBASIC2.3□□□□□ -2.04
NUP98P52948 AC117490.2-201ENST00000610042 594 ntBASIC2.3□□□□□ -2.04
NUP98P52948 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NUP98P52948 MTND4P31-201ENST00000425607 1343 ntBASIC2.29□□□□□ -2.04
NUP98P52948 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NUP98P52948 RNA5SP190-201ENST00000365222 118 ntBASIC2.29□□□□□ -2.04
NUP98P52948 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUP98P52948 RNA5SP270-201ENST00000411361 118 ntBASIC2.29□□□□□ -2.04
NUP98P52948 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NUP98P52948 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP98P52948 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.29□□□□□ -2.04
NUP98P52948 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP98P52948 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP98P52948 AC025181.1-201ENST00000477507 416 ntBASIC2.29□□□□□ -2.04
NUP98P52948 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.29□□□□□ -2.04
NUP98P52948 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.29□□□□□ -2.04
NUP98P52948 RNU1-40P-201ENST00000516816 164 ntBASIC2.29□□□□□ -2.04
NUP98P52948 RNU1-97P-201ENST00000516872 164 ntBASIC2.29□□□□□ -2.04
NUP98P52948 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.29□□□□□ -2.04
NUP98P52948 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NUP98P52948 MIR3683-201ENST00000580847 82 ntBASIC2.29□□□□□ -2.04
NUP98P52948 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NUP98P52948 MIR6864-201ENST00000617935 70 ntBASIC2.29□□□□□ -2.04
NUP98P52948 AC009950.2-201ENST00000636548 183 ntBASIC2.29□□□□□ -2.04
NUP98P52948 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUP98P52948 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NUP98P52948 Y_RNA.4-201ENST00000362333 112 ntBASIC2.28□□□□□ -2.04
NUP98P52948 SNORA67.5-201ENST00000391036 107 ntBASIC2.28□□□□□ -2.04
NUP98P52948 RPL23AP47-201ENST00000408017 460 ntBASIC2.28□□□□□ -2.04
NUP98P52948 MIR1323-201ENST00000408090 73 ntBASIC2.28□□□□□ -2.04
NUP98P52948 RNU6-321P-201ENST00000410912 106 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AC023128.2-201ENST00000420880 1223 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP98P52948 RPL17P49-201ENST00000443728 411 ntBASIC2.28□□□□□ -2.04
NUP98P52948 HMGB1P26-201ENST00000452520 628 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AC027673.1-201ENST00000456245 405 ntBASIC2.28□□□□□ -2.04
NUP98P52948 RPS15AP1-201ENST00000457423 391 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.28□□□□□ -2.04
NUP98P52948 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.28□□□□□ -2.04
NUP98P52948 MTND5P4-201ENST00000514978 288 ntBASIC2.28□□□□□ -2.04
NUP98P52948 RNU6-250P-201ENST00000516958 103 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AC067904.2-201ENST00000517322 1283 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP98P52948 AC025881.1-201ENST00000518851 512 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.28□□□□□ -2.04
NUP98P52948 AF279873.1-201ENST00000523393 313 ntBASIC2.28□□□□□ -2.04
NUP98P52948 MIR4498-201ENST00000577599 66 ntBASIC2.28□□□□□ -2.04
NUP98P52948 AL356280.1-201ENST00000603614 379 ntBASIC2.28□□□□□ -2.04
NUP98P52948 HMGN2P28-201ENST00000606102 262 ntBASIC2.28□□□□□ -2.04
NUP98P52948 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
NUP98P52948 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms