Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SUMO2P20-201ENST00000520803 283 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AP002748.2-201ENST00000528671 348 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.19□□□□□ -1.9
NKX2-1P43699 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-1P43699 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-1P43699 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-1P43699 AC090877.1-201ENST00000561418 344 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
NKX2-1P43699 MIR3921-201ENST00000577308 85 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 MIR4528-201ENST00000577763 90 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.19□□□□□ -1.9
NKX2-1P43699 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.19□□□□□ -1.9
NKX2-1P43699 UBE2L4-201ENST00000587688 464 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AP001029.3-201ENST00000588063 596 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 BNIP3P8-201ENST00000597863 560 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.19□□□□□ -1.9
NKX2-1P43699 BDH2P1-201ENST00000602288 736 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC011468.4-201ENST00000603942 409 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AL356218.2-201ENST00000605264 187 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-1P43699 AC103591.3-201ENST00000608684 209 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 Z99129.1-201ENST00000612510 255 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AC093838.1-201ENST00000613014 469 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AL450472.3-201ENST00000615578 367 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 U7.8-201ENST00000619968 63 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AL158801.5-201ENST00000623123 465 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AL159972.1-201ENST00000625150 448 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
NKX2-1P43699 PRO1804-201ENST00000623780 2050 ntBASIC3.19□□□□□ -1.9
NKX2-1P43699 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-1P43699 AF127577.6-201ENST00000623352 2191 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NKX2-1P43699 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-1P43699 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-1P43699 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-1P43699 Y_RNA.46-201ENST00000362695 102 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-1P43699 DEFB109C-201ENST00000382575 264 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 DEFB109B-201ENST00000382656 264 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RNU6-533P-201ENST00000384144 107 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RNU6-297P-201ENST00000384636 107 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RNU6-192P-201ENST00000391253 100 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RPS20P2-201ENST00000402520 389 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 MIR1290-201ENST00000408735 78 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RNU6-516P-201ENST00000411381 104 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 SSXP9-201ENST00000417503 292 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC017083.1-201ENST00000428093 483 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AC079780.1-201ENST00000428259 207 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AL589823.1-201ENST00000429577 183 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RPS29P17-201ENST00000430795 166 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 COX6B1P7-201ENST00000430845 235 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 RABEPKP1-201ENST00000440529 1026 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 MTND6P13-201ENST00000443510 523 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RANP8-201ENST00000444720 713 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.18□□□□□ -1.9
NKX2-1P43699 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC007967.1-201ENST00000455422 1159 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-1P43699 SNRPGP3-201ENST00000469405 227 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 TRBV12-2-201ENST00000489763 344 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 MTND2P33-201ENST00000506452 1031 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC099522.1-202ENST00000514718 367 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RN7SKP289-201ENST00000517244 295 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-1P43699 MTND4LP18-201ENST00000526864 291 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AL121576.1-201ENST00000556055 276 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 MED28P6-201ENST00000558776 231 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-1P43699 MIR4330-201ENST00000579077 105 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AC060771.1-201ENST00000582031 164 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 MIR5096-201ENST00000583713 70 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC022146.1-201ENST00000595307 847 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AL161729.3-201ENST00000603533 673 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AP001330.4-201ENST00000604350 154 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AC090578.1-201ENST00000604955 591 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 RNU6-87P-201ENST00000607561 108 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-1P43699 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-1P43699 AC131902.3-201ENST00000611767 581 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AC015540.1-201ENST00000615828 501 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AP000346.3-201ENST00000622821 210 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AC243312.2-201ENST00000623340 601 ntBASIC3.18□□□□□ -1.9
NKX2-1P43699 AL138713.1-201ENST00000624026 2130 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms