Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A5P29400 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
COL4A5P29400 ARL5AP3-201ENST00000439327 386 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.24□□□□□ -2.05
COL4A5P29400 Z73417.1-201ENST00000447373 778 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 AL157827.1-201ENST00000447622 132 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 RPL23AP7-203ENST00000449021 469 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 TVP23BP2-201ENST00000455082 615 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 OR7L1P-201ENST00000456181 380 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 CFTRP1-201ENST00000456646 183 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 RNU7-95P-201ENST00000459222 64 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A5P29400 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.24□□□□□ -2.05
COL4A5P29400 TTC39CP1-201ENST00000512513 755 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 RNU4-60P-201ENST00000517239 135 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A5P29400 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A5P29400 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.24□□□□□ -2.05
COL4A5P29400 AC087241.2-201ENST00000535801 324 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 AC115989.2-201ENST00000578640 563 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 PCNAP1-202ENST00000595299 752 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 AP003072.4-201ENST00000624580 310 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL4A5P29400 AL353746.1-201ENST00000566293 6881 ntBASIC2.24□□□□□ -2.05
COL4A5P29400 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.24□□□□□ -2.05
COL4A5P29400 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.23□□□□□ -2.05
COL4A5P29400 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A5P29400 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.23□□□□□ -2.05
COL4A5P29400 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A5P29400 MIR1276-201ENST00000408707 83 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 RPL23AP39-201ENST00000415533 405 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 MED6P1-201ENST00000439659 713 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.23□□□□□ -2.05
COL4A5P29400 RPS29P12-201ENST00000460178 152 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 AC140059.1-201ENST00000489238 361 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 AC111193.1-201ENST00000504097 155 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 HMGB3P15-201ENST00000507326 574 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.23□□□□□ -2.05
COL4A5P29400 RPS3AP4-201ENST00000555161 764 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 AL049870.4-201ENST00000555741 486 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.23□□□□□ -2.05
COL4A5P29400 MIR3670-2-201ENST00000582974 65 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 MIR3670-1-201ENST00000584160 65 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 MIR3670-3-201ENST00000584855 65 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
COL4A5P29400 MIR3670-4-201ENST00000612260 65 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 MIR7973-1-201ENST00000614683 76 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 AC073348.1-201ENST00000623002 331 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 MIR4496-201ENST00000635896 61 ntBASIC2.23□□□□□ -2.05
COL4A5P29400 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A5P29400 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
COL4A5P29400 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A5P29400 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A5P29400 SET-203ENST00000372688 801 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A5P29400 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A5P29400 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A5P29400 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A5P29400 DNAJC19P4-201ENST00000440115 345 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 CDC42P1-201ENST00000456658 548 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A5P29400 RNU2-58P-201ENST00000516403 183 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 AC025881.1-201ENST00000518851 512 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 COX6CP5-201ENST00000527162 228 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 AC007536.1-201ENST00000533382 349 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 AC010546.1-201ENST00000569391 485 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 RPS3AP23-202ENST00000574601 686 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 RMST_2.1-201ENST00000617263 136 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A5P29400 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A5P29400 ZNF720P1-201ENST00000562403 1939 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A5P29400 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
COL4A5P29400 RNA5SP189-201ENST00000364920 115 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 HNRNPDP2-201ENST00000406475 478 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A5P29400 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A5P29400 RPL23AP33-201ENST00000442301 452 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 AP000873.1-201ENST00000463987 400 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 AC090543.1-201ENST00000492168 485 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 AL589994.2-201ENST00000621124 579 ntBASIC2.22□□□□□ -2.05
COL4A5P29400 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.21□□□□□ -2.06
COL4A5P29400 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
COL4A5P29400 U8.9-201ENST00000365667 134 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.21□□□□□ -2.06
COL4A5P29400 AP000275.1-201ENST00000411943 390 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.21□□□□□ -2.06
COL4A5P29400 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.21□□□□□ -2.06
COL4A5P29400 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.21□□□□□ -2.06
COL4A5P29400 AC117532.1-201ENST00000514638 323 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.21□□□□□ -2.06
COL4A5P29400 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.21□□□□□ -2.06
COL4A5P29400 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.21□□□□□ -2.06
COL4A5P29400 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.21□□□□□ -2.06
COL4A5P29400 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.21□□□□□ -2.06
COL4A5P29400 AC004486.1-201ENST00000546846 233 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 POLR2KP1-201ENST00000553226 168 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 SUB1P3-201ENST00000564581 315 ntBASIC2.21□□□□□ -2.06
COL4A5P29400 AC006270.2-201ENST00000578523 652 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms