Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RPS15AP34-201ENST00000487776 387 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC093801.2-201ENST00000503966 1050 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC093767.1-201ENST00000504523 156 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMAP28067 RNU6-27P-201ENST00000516146 107 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AP003355.1-201ENST00000518956 587 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMAP28067 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 AP003066.2-201ENST00000529375 555 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AP002404.1-201ENST00000532005 451 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 CYB5AP5-201ENST00000549779 389 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC122134.1-202ENST00000569111 1201 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 MIR3921-201ENST00000577308 85 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC090330.1-201ENST00000588646 764 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DMAP28067 GAS5-AS1-201ENST00000602767 694 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 NRBF2P5-201ENST00000603087 788 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AL022099.1-201ENST00000604551 712 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AC002487.1-201ENST00000604565 994 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AL161756.2-201ENST00000604597 246 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AP005137.2-201ENST00000609238 400 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 AP000254.1-201ENST00000609934 520 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 VN1R74P-201ENST00000613259 503 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DMAP28067 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.36□□□□□ -2.03
HLA-DMAP28067 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DMAP28067 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DMAP28067 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DMAP28067 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 SNORA63.3-201ENST00000362682 132 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 RNU6-251P-201ENST00000363235 104 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 RNU6-1155P-201ENST00000363554 107 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 RNU6-115P-201ENST00000364310 107 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 SNORD51-201ENST00000384320 80 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 MIR217-201ENST00000384817 110 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 MTCYBP32-201ENST00000427945 1084 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC005300.1-201ENST00000428401 373 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 OR4K11P-201ENST00000431829 904 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 RPS15AP7-201ENST00000439294 405 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 HMGN1P5-201ENST00000448591 263 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 RN7SL542P-201ENST00000467147 294 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC092902.1-201ENST00000486999 259 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC006390.1-201ENST00000508068 283 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC107222.1-201ENST00000510899 637 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 RNU5A-7P-201ENST00000515979 116 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC009812.2-201ENST00000517657 457 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 CASP1P1-201ENST00000526345 212 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 OR5BN1P-201ENST00000532955 829 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC123904.3-201ENST00000547218 814 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC093510.2-201ENST00000562820 896 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC010546.1-201ENST00000569391 485 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 RPL21P136-201ENST00000605378 396 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 AP000238.1-201ENST00000608759 426 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.35□□□□□ -2.03
HLA-DMAP28067 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DMAP28067 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DMAP28067 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
HLA-DMAP28067 AL359693.1-201ENST00000614959 2407 ntBASIC2.34□□□□□ -2.03
HLA-DMAP28067 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DMAP28067 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DMAP28067 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HLA-DMAP28067 DEFB108F-201ENST00000344638 222 ntBASIC2.34□□□□□ -2.03
HLA-DMAP28067 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
HLA-DMAP28067 Y_RNA.126-201ENST00000363382 111 ntBASIC2.34□□□□□ -2.03
HLA-DMAP28067 RNU6-468P-201ENST00000384003 109 ntBASIC2.34□□□□□ -2.03
HLA-DMAP28067 MTCO2P31-201ENST00000402702 684 ntBASIC2.34□□□□□ -2.03
HLA-DMAP28067 AL024474.1-201ENST00000404655 591 ntBASIC2.34□□□□□ -2.03
HLA-DMAP28067 AL513475.1-201ENST00000406602 315 ntBASIC2.34□□□□□ -2.03
HLA-DMAP28067 BOLA3P4-201ENST00000418151 400 ntBASIC2.34□□□□□ -2.03
HLA-DMAP28067 KRR1P1-201ENST00000419430 803 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms