Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.53□□□□□ -1.52
LMNB1P20700 AL365204.3-201ENST00000612448 685 ntBASIC5.53□□□□□ -1.52
LMNB1P20700 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMNB1P20700 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMNB1P20700 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.53□□□□□ -1.52
LMNB1P20700 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.53□□□□□ -1.52
LMNB1P20700 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMNB1P20700 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMNB1P20700 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LMNB1P20700 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMNB1P20700 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LMNB1P20700 AC011978.2-201ENST00000569835 2054 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMNB1P20700 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMNB1P20700 AC100778.3-201ENST00000580060 1750 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.52□□□□□ -1.53
LMNB1P20700 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LMNB1P20700 AC006971.1-201ENST00000407916 4486 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.52□□□□□ -1.53
LMNB1P20700 MIR200C-201ENST00000384980 68 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 U3.29-201ENST00000391296 212 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.52□□□□□ -1.53
LMNB1P20700 RNU6ATAC-201ENST00000408749 126 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 RNU2-15P-201ENST00000410692 191 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.52□□□□□ -1.53
LMNB1P20700 MTATP6P16-201ENST00000434543 526 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 UBE2V1P13-201ENST00000436983 439 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.52□□□□□ -1.53
LMNB1P20700 AC093156.1-201ENST00000440382 670 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 HMGB3P9-201ENST00000441799 583 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.52□□□□□ -1.53
LMNB1P20700 AC146944.2-203ENST00000502493 354 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.52□□□□□ -1.53
LMNB1P20700 TTC39CP1-201ENST00000512513 755 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 AC139495.1-202ENST00000513164 354 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 AC114797.1-201ENST00000514003 728 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.52□□□□□ -1.53
LMNB1P20700 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.52□□□□□ -1.53
LMNB1P20700 AC128657.1-201ENST00000549459 145 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 SETP2-201ENST00000553886 926 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.52□□□□□ -1.53
LMNB1P20700 AC053481.4-201ENST00000583164 216 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 AC007687.1-201ENST00000602704 304 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 MIR6875-201ENST00000617506 72 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 uc_338.13-201ENST00000618243 179 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 AL138713.1-201ENST00000624026 2130 ntBASIC5.52□□□□□ -1.53
LMNB1P20700 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.52□□□□□ -1.53
LMNB1P20700 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.52□□□□□ -1.53
LMNB1P20700 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMNB1P20700 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LMNB1P20700 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LMNB1P20700 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LMNB1P20700 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LMNB1P20700 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LMNB1P20700 MIR514A2-201ENST00000385131 88 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 MIR514A3-201ENST00000385132 88 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.51□□□□□ -1.53
LMNB1P20700 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 AL590004.1-201ENST00000405321 300 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 RPL35AP21-201ENST00000437667 333 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.51□□□□□ -1.53
LMNB1P20700 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.51□□□□□ -1.53
LMNB1P20700 MTND1P18-201ENST00000448191 573 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 AL162151.2-201ENST00000448875 158 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 DHFRP3-201ENST00000455595 559 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 MRPS17P3-201ENST00000465453 385 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 AL049714.1-201ENST00000466686 347 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
LMNB1P20700 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.51□□□□□ -1.53
LMNB1P20700 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 AC105031.1-201ENST00000518550 476 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.51□□□□□ -1.53
LMNB1P20700 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.51□□□□□ -1.53
LMNB1P20700 AP005435.4-201ENST00000529514 284 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.51□□□□□ -1.53
LMNB1P20700 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.51□□□□□ -1.53
LMNB1P20700 AL161756.2-201ENST00000604597 246 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 RNU6-89P-201ENST00000606519 100 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 AL590099.1-201ENST00000615276 138 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 AC039056.2-201ENST00000622261 511 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.51□□□□□ -1.53
LMNB1P20700 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.51□□□□□ -1.53
LMNB1P20700 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.51□□□□□ -1.53
LMNB1P20700 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 AL136164.3-201ENST00000624429 3978 ntBASIC5.51□□□□□ -1.53
LMNB1P20700 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.51□□□□□ -1.53
LMNB1P20700 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LMNB1P20700 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMNB1P20700 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LMNB1P20700 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMNB1P20700 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LMNB1P20700 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms