Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 EIF3FP1-201ENST00000613970 806 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.67□□□□□ -1.66
COL6A2P12110 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.67□□□□□ -1.66
COL6A2P12110 EIF2AP4-201ENST00000424793 1781 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 TAB3P1-202ENST00000452645 1634 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL6A2P12110 BDP1P-201ENST00000582658 1990 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.67□□□□□ -1.66
COL6A2P12110 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL6A2P12110 ZNF33CP-201ENST00000432492 2030 ntBASIC4.67□□□□□ -1.66
COL6A2P12110 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
COL6A2P12110 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL6A2P12110 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL6A2P12110 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
COL6A2P12110 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.66□□□□□ -1.66
COL6A2P12110 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL6A2P12110 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL6A2P12110 Y_RNA.184-201ENST00000363884 108 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 RNU6-522P-201ENST00000364497 107 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL6A2P12110 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.66□□□□□ -1.66
COL6A2P12110 RNU6-637P-201ENST00000384050 107 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 RNU6-1029P-201ENST00000384109 107 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 RNU6-432P-201ENST00000384196 109 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 RNU6-831P-201ENST00000384548 107 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 RNU11-4P-201ENST00000391149 133 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 U3.30-201ENST00000391308 210 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AL109755.1-201ENST00000401791 649 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AL606923.1-201ENST00000406616 190 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.66□□□□□ -1.66
COL6A2P12110 RNU2-36P-201ENST00000410361 191 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.66□□□□□ -1.66
COL6A2P12110 OR6C66P-201ENST00000414917 930 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 PSMA2P3-201ENST00000429685 675 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AL359265.2-201ENST00000434367 631 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.66□□□□□ -1.66
COL6A2P12110 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.66□□□□□ -1.66
COL6A2P12110 TPT1P13-201ENST00000449760 499 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.66□□□□□ -1.66
COL6A2P12110 AC007537.2-201ENST00000472093 511 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 RN7SL41P-201ENST00000476144 297 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AC093270.2-201ENST00000486157 792 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.66□□□□□ -1.66
COL6A2P12110 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.66□□□□□ -1.66
COL6A2P12110 TTC39CP1-201ENST00000512513 755 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.66□□□□□ -1.66
COL6A2P12110 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.66□□□□□ -1.66
COL6A2P12110 Y_RNA.665-201ENST00000516177 98 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 RN7SKP66-201ENST00000516681 231 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 RN7SKP234-201ENST00000517173 224 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.66□□□□□ -1.66
COL6A2P12110 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.66□□□□□ -1.66
COL6A2P12110 DEFB108D-201ENST00000527787 222 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 PTP4A1P6-201ENST00000531034 478 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AP003385.6-201ENST00000531603 374 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.66□□□□□ -1.66
COL6A2P12110 AC133555.2-201ENST00000550213 292 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 NCAPGP2-201ENST00000557911 754 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 MTCO3P13-201ENST00000577757 781 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 MIR4458-201ENST00000578872 75 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AC024619.4-201ENST00000580924 316 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
COL6A2P12110 AL133255.1-201ENST00000606374 441 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.66□□□□□ -1.66
COL6A2P12110 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.66□□□□□ -1.66
COL6A2P12110 AC133644.2-201ENST00000608142 540 ntBASIC4.66□□□□□ -1.66
COL6A2P12110 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL6A2P12110 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL6A2P12110 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.66□□□□□ -1.66
COL6A2P12110 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL6A2P12110 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL6A2P12110 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL6A2P12110 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
COL6A2P12110 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.65□□□□□ -1.66
COL6A2P12110 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL6A2P12110 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.65□□□□□ -1.66
COL6A2P12110 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.65□□□□□ -1.66
COL6A2P12110 AL645937.1-201ENST00000641739 1652 ntBASIC4.65□□□□□ -1.66
COL6A2P12110 RNU6-179P-201ENST00000363350 107 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 RNU6-1284P-201ENST00000363701 100 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 Y_RNA.326-201ENST00000365176 113 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 RNU4-66P-201ENST00000365199 138 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 Y_RNA.419-201ENST00000384041 102 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
COL6A2P12110 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.65□□□□□ -1.67
COL6A2P12110 AF228730.4-201ENST00000421457 183 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 HSPE1P1-201ENST00000421494 318 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 RPS27AP12-201ENST00000429552 465 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 AL590639.1-201ENST00000456484 337 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.65□□□□□ -1.67
COL6A2P12110 AC004453.1-201ENST00000487895 408 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.65□□□□□ -1.67
COL6A2P12110 RNA5SP446-201ENST00000515955 82 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 RNA5SP503-201ENST00000517047 117 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 NARSP2-201ENST00000518524 679 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 AC103783.1-201ENST00000520506 373 ntBASIC4.65□□□□□ -1.67
COL6A2P12110 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.65□□□□□ -1.67
COL6A2P12110 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.65□□□□□ -1.67
COL6A2P12110 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 159 ms