Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.93□□□□□ -1.78
MMP3P08254 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.93□□□□□ -1.78
MMP3P08254 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.93□□□□□ -1.78
MMP3P08254 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.93□□□□□ -1.78
MMP3P08254 HSPE1P28-201ENST00000443139 211 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AL592447.1-201ENST00000447592 540 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AP000542.1-201ENST00000448473 371 ntBASIC3.93□□□□□ -1.78
MMP3P08254 SSXP1-201ENST00000453640 473 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AP000926.1-201ENST00000479573 241 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AC093663.1-201ENST00000497190 394 ntBASIC3.93□□□□□ -1.78
MMP3P08254 ARL2BPP4-201ENST00000506854 471 ntBASIC3.93□□□□□ -1.78
MMP3P08254 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.93□□□□□ -1.78
MMP3P08254 AC093677.1-201ENST00000514414 678 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.93□□□□□ -1.78
MMP3P08254 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.93□□□□□ -1.78
MMP3P08254 RN7SKP82-201ENST00000516786 223 ntBASIC3.93□□□□□ -1.78
MMP3P08254 RNU6-579P-201ENST00000516879 102 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AC022790.1-201ENST00000522872 204 ntBASIC3.93□□□□□ -1.78
MMP3P08254 HSPA8P13-201ENST00000523715 472 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AP002453.2-201ENST00000533503 320 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AC068587.4-201ENST00000533893 186 ntBASIC3.93□□□□□ -1.78
MMP3P08254 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.93□□□□□ -1.78
MMP3P08254 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.93□□□□□ -1.78
MMP3P08254 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.93□□□□□ -1.78
MMP3P08254 AC073648.5-201ENST00000603502 305 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AL390208.1-201ENST00000605885 644 ntBASIC3.93□□□□□ -1.78
MMP3P08254 AC104010.1-201ENST00000616889 150 ntBASIC3.93□□□□□ -1.78
MMP3P08254 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MMP3P08254 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MMP3P08254 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MMP3P08254 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.93□□□□□ -1.78
MMP3P08254 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MMP3P08254 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
MMP3P08254 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
MMP3P08254 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MMP3P08254 XIAPP3-201ENST00000312918 795 ntBASIC3.92□□□□□ -1.78
MMP3P08254 MIR448-201ENST00000362131 111 ntBASIC3.92□□□□□ -1.78
MMP3P08254 RNVU1-3-201ENST00000364313 161 ntBASIC3.92□□□□□ -1.78
MMP3P08254 RNU6-744P-201ENST00000365557 107 ntBASIC3.92□□□□□ -1.78
MMP3P08254 RNU6-1316P-201ENST00000384242 108 ntBASIC3.92□□□□□ -1.78
MMP3P08254 BX323014.1-201ENST00000412876 237 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC017079.2-201ENST00000416102 485 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC127526.1-201ENST00000417526 366 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC104651.1-201ENST00000427559 735 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AL590233.1-201ENST00000430017 456 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.92□□□□□ -1.78
MMP3P08254 USP9YP28-201ENST00000435142 589 ntBASIC3.92□□□□□ -1.78
MMP3P08254 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.92□□□□□ -1.78
MMP3P08254 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.92□□□□□ -1.78
MMP3P08254 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.92□□□□□ -1.78
MMP3P08254 MTND1P27-201ENST00000451117 902 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.92□□□□□ -1.78
MMP3P08254 MTCO1P42-201ENST00000457379 726 ntBASIC3.92□□□□□ -1.78
MMP3P08254 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.92□□□□□ -1.78
MMP3P08254 AC087312.1-201ENST00000471411 480 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.92□□□□□ -1.78
MMP3P08254 AC011825.1-201ENST00000484967 388 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC069499.1-201ENST00000489433 509 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.92□□□□□ -1.78
MMP3P08254 AC023424.2-201ENST00000493479 777 ntBASIC3.92□□□□□ -1.78
MMP3P08254 HMGB1P21-201ENST00000502313 581 ntBASIC3.92□□□□□ -1.78
MMP3P08254 FABP5P5-201ENST00000515537 406 ntBASIC3.92□□□□□ -1.78
MMP3P08254 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.92□□□□□ -1.78
MMP3P08254 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.92□□□□□ -1.78
MMP3P08254 OR6C73P-201ENST00000546432 358 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.92□□□□□ -1.78
MMP3P08254 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.92□□□□□ -1.78
MMP3P08254 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.92□□□□□ -1.78
MMP3P08254 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.92□□□□□ -1.78
MMP3P08254 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.92□□□□□ -1.78
MMP3P08254 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.92□□□□□ -1.78
MMP3P08254 AC079089.3-201ENST00000603094 673 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC007566.2-201ENST00000603642 413 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AL009028.1-201ENST00000604895 802 ntBASIC3.92□□□□□ -1.78
MMP3P08254 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.92□□□□□ -1.78
MMP3P08254 AC008498.1-201ENST00000613012 531 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC068792.1-201ENST00000621354 417 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AL445264.1-201ENST00000621719 171 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AC004009.2-201ENST00000623016 728 ntBASIC3.92□□□□□ -1.78
MMP3P08254 AL732372.2-225ENST00000642124 456 ntBASIC3.92□□□□□ -1.78
MMP3P08254 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
MMP3P08254 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MMP3P08254 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MMP3P08254 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.91□□□□□ -1.78
MMP3P08254 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.91□□□□□ -1.78
MMP3P08254 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
MMP3P08254 Y_RNA.41-201ENST00000362646 102 ntBASIC3.91□□□□□ -1.78
MMP3P08254 RNU6-533P-201ENST00000384144 107 ntBASIC3.91□□□□□ -1.78
MMP3P08254 RNU6-297P-201ENST00000384636 107 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AL356473.1-201ENST00000406203 1408 ntBASIC3.91□□□□□ -1.78
MMP3P08254 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.91□□□□□ -1.78
MMP3P08254 RN7SKP266-201ENST00000410232 287 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AC096664.2-201ENST00000411843 406 ntBASIC3.91□□□□□ -1.78
MMP3P08254 HMGN1P14-201ENST00000412459 517 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AC007899.1-201ENST00000412776 775 ntBASIC3.91□□□□□ -1.78
MMP3P08254 AL513174.1-201ENST00000423182 629 ntBASIC3.91□□□□□ -1.78
MMP3P08254 PSMA2P3-201ENST00000429685 675 ntBASIC3.91□□□□□ -1.78
MMP3P08254 FTH1P6-201ENST00000430768 320 ntBASIC3.91□□□□□ -1.78
MMP3P08254 RPL7P36-201ENST00000444633 681 ntBASIC3.91□□□□□ -1.78
MMP3P08254 USP9YP12-201ENST00000450481 570 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms