Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC093788.1-201ENST00000609356 927 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AL121757.2-201ENST00000611223 313 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC000123.2-201ENST00000623124 461 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC067931.1-201ENST00000624190 671 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 MIR3662-201ENST00000637030 95 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 KPNA2P2-201ENST00000419546 1489 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 AC024560.2-201ENST00000507981 1497 ntBASIC4.53□□□□□ -1.68
HLA-DOAP06340 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DOAP06340 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DOAP06340 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DOAP06340 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DOAP06340 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 Y_RNA.46-201ENST00000362695 102 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DOAP06340 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 RNU6-1103P-201ENST00000384150 107 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 SNORD115.1-201ENST00000391109 76 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AL133384.1-201ENST00000412744 351 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AL035423.1-201ENST00000420331 213 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 PIGFP2-201ENST00000421400 651 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC096632.1-201ENST00000427395 310 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC105402.2-201ENST00000438503 358 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC002381.1-201ENST00000447049 280 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC005297.2-201ENST00000450430 606 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC239809.1-201ENST00000450470 217 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC022364.2-201ENST00000457963 554 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC007182.2-201ENST00000489251 402 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC005726.1-201ENST00000494679 427 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 RNU6-1153P-201ENST00000516760 105 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AL157687.1-201ENST00000554853 619 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 UBE2V2P2-201ENST00000587677 504 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC024220.1-201ENST00000603675 484 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC128687.2-201ENST00000609657 566 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC123768.4-201ENST00000616244 701 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC139792.3-201ENST00000623525 224 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DOAP06340 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DOAP06340 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DOAP06340 MAPK10-372ENST00000641954 3413 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 AC093775.1-201ENST00000624154 1868 ntBASIC4.52□□□□□ -1.69
HLA-DOAP06340 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DOAP06340 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DOAP06340 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DOAP06340 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 Y_RNA.159-201ENST00000363674 87 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 RNU6-1226P-201ENST00000384317 107 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 SNORD3H-201ENST00000384486 214 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 MIR7-3-201ENST00000384898 110 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 RNU6-1009P-201ENST00000390996 107 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC068050.1-201ENST00000394891 380 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 AL356776.1-201ENST00000406574 447 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 NUP35P2-201ENST00000416748 943 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 RPL21P111-201ENST00000418453 477 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC012498.1-201ENST00000424037 437 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 TIMM9P3-201ENST00000428659 274 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 YME1L1P1-201ENST00000429435 297 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 KCTD9P3-201ENST00000434597 1169 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 SDCBPP1-201ENST00000440192 890 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 RPS17P13-201ENST00000448974 407 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC023598.1-201ENST00000472521 361 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC090453.1-201ENST00000495560 436 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 RPL31P61-201ENST00000496160 376 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC114967.1-201ENST00000504890 259 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC024589.1-201ENST00000512207 263 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 RNU6-445P-201ENST00000516949 107 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 RNU6-1003P-201ENST00000517099 105 ntBASIC4.51□□□□□ -1.69
HLA-DOAP06340 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DOAP06340 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms