Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL1A1P02452 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COL1A1P02452 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COL1A1P02452 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.37□□□□□ -2.03
COL1A1P02452 RNU6-600P-201ENST00000362524 99 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COL1A1P02452 RNU6-317P-201ENST00000384031 107 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 RNA5SP338-201ENST00000410495 85 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 RNU2-71P-201ENST00000411395 189 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 RPL7P46-201ENST00000425129 740 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 MTCO3P30-201ENST00000426425 670 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 RSL24D1P2-201ENST00000445584 366 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.37□□□□□ -2.03
COL1A1P02452 FABP5P13-201ENST00000452144 328 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AC233279.1-201ENST00000455300 423 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 RPL21P104-201ENST00000464143 478 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 NCOR1P1-202ENST00000486162 291 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AC098799.2-201ENST00000509466 868 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AC110792.2-201ENST00000510278 224 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.37□□□□□ -2.03
COL1A1P02452 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.6-201ENST00000603753 252 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.11-201ENST00000604059 253 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.10-201ENST00000604330 253 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AC008162.1-201ENST00000604718 254 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.1-201ENST00000604752 252 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.2-201ENST00000604983 252 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.5-201ENST00000605253 252 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.4-201ENST00000605279 254 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.12-201ENST00000605291 253 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.8-201ENST00000605353 252 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.9-201ENST00000605428 253 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AL670379.7-201ENST00000605823 252 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.37□□□□□ -2.03
COL1A1P02452 AC055764.2-201ENST00000610089 670 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 VIS1.1-201ENST00000610517 203 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 AC034102.8-201ENST00000615146 484 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 OR1S1-201ENST00000624470 978 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL1A1P02452 AL136164.4-201ENST00000625013 2135 ntBASIC2.37□□□□□ -2.03
COL1A1P02452 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
COL1A1P02452 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
COL1A1P02452 AL109809.4-201ENST00000603520 2185 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 AC005336.3-201ENST00000623833 2679 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 RNY1P10-201ENST00000363268 113 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 SNORA7.2-201ENST00000364446 145 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 AL590084.1-201ENST00000407885 387 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 RNU6-233P-201ENST00000410845 141 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 AC092638.1-201ENST00000411966 1275 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.36□□□□□ -2.03
COL1A1P02452 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL1A1P02452 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.36□□□□□ -2.03
COL1A1P02452 NAMPTP2-201ENST00000505629 1115 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 FAM92A1P1-201ENST00000528023 890 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.36□□□□□ -2.03
COL1A1P02452 AC126177.3-201ENST00000551839 688 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 AP004372.1-201ENST00000604842 844 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 AC002064.3-201ENST00000623448 346 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.36□□□□□ -2.03
COL1A1P02452 FAM35CP-201ENST00000554755 2470 ntBASIC2.36□□□□□ -2.03
COL1A1P02452 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.35□□□□□ -2.03
COL1A1P02452 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.35□□□□□ -2.03
COL1A1P02452 SNORD65-201ENST00000391079 73 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 FGF7P8-201ENST00000402994 292 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.35□□□□□ -2.03
COL1A1P02452 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.35□□□□□ -2.03
COL1A1P02452 AC008173.1-201ENST00000418901 264 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.35□□□□□ -2.03
COL1A1P02452 NDUFB4P6-201ENST00000436819 366 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.35□□□□□ -2.03
COL1A1P02452 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.35□□□□□ -2.03
COL1A1P02452 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.35□□□□□ -2.03
COL1A1P02452 AC007182.2-201ENST00000489251 402 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 AC055855.1-201ENST00000489563 579 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.35□□□□□ -2.03
COL1A1P02452 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.35□□□□□ -2.03
COL1A1P02452 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.35□□□□□ -2.03
COL1A1P02452 HMGB1P1-201ENST00000522557 636 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.35□□□□□ -2.03
COL1A1P02452 RPS3AP23-202ENST00000574601 686 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 VN1R80P-201ENST00000597126 338 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 DUXAP3-201ENST00000603616 594 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL1A1P02452 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
COL1A1P02452 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL1A1P02452 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL1A1P02452 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL1A1P02452 CKAP2P1-201ENST00000555477 2049 ntBASIC2.35□□□□□ -2.03
COL1A1P02452 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
COL1A1P02452 RNU6-1251P-201ENST00000364502 107 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 LUZP4P1-201ENST00000415420 344 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 USP9YP27-201ENST00000418455 438 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 AC244098.2-201ENST00000422068 99 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 AL358453.1-201ENST00000422522 250 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 AC023347.2-201ENST00000433994 462 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 RPL23AP16-201ENST00000441715 421 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 SSXP4-201ENST00000451349 245 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 AL021397.1-201ENST00000451806 248 ntBASIC2.34□□□□□ -2.03
COL1A1P02452 OR7L1P-201ENST00000456181 380 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms