Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
HERC2O95714 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HERC2O95714 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.12□□□□□ -2.23
HERC2O95714 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HERC2O95714 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HERC2O95714 U3.15-201ENST00000365398 212 ntBASIC1.12□□□□□ -2.23
HERC2O95714 RNU2-6P-201ENST00000411404 190 ntBASIC1.12□□□□□ -2.23
HERC2O95714 AC009474.2-201ENST00000451383 136 ntBASIC1.12□□□□□ -2.23
HERC2O95714 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HERC2O95714 MIR2114-201ENST00000516645 80 ntBASIC1.12□□□□□ -2.23
HERC2O95714 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.12□□□□□ -2.23
HERC2O95714 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.12□□□□□ -2.23
HERC2O95714 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.12□□□□□ -2.23
HERC2O95714 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
HERC2O95714 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.11□□□□□ -2.23
HERC2O95714 RNU6-198P-201ENST00000384258 104 ntBASIC1.11□□□□□ -2.23
HERC2O95714 HMGB1P11-201ENST00000413899 637 ntBASIC1.11□□□□□ -2.23
HERC2O95714 CALM1P1-201ENST00000442082 433 ntBASIC1.11□□□□□ -2.23
HERC2O95714 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
HERC2O95714 RNA5SP330-201ENST00000517096 96 ntBASIC1.11□□□□□ -2.23
HERC2O95714 AC008127.2-201ENST00000549925 1075 ntBASIC1.11□□□□□ -2.23
HERC2O95714 AL138955.1-201ENST00000622881 1040 ntBASIC1.11□□□□□ -2.23
HERC2O95714 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
HERC2O95714 AL513175.2-201ENST00000422071 443 ntBASIC1.11□□□□□ -2.23
HERC2O95714 RPS6P15-201ENST00000431996 751 ntBASIC1.11□□□□□ -2.23
HERC2O95714 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.11□□□□□ -2.23
HERC2O95714 AP000873.1-201ENST00000463987 400 ntBASIC1.11□□□□□ -2.23
HERC2O95714 AC068305.1-201ENST00000497406 726 ntBASIC1.11□□□□□ -2.23
HERC2O95714 AC073387.2-201ENST00000604797 784 ntBASIC1.11□□□□□ -2.23
HERC2O95714 STMN1P1-201ENST00000617809 440 ntBASIC1.11□□□□□ -2.23
HERC2O95714 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.11□□□□□ -2.23
HERC2O95714 RNU4-51P-201ENST00000364206 140 ntBASIC1.11□□□□□ -2.23
HERC2O95714 RPL36AP33-201ENST00000450395 310 ntBASIC1.11□□□□□ -2.23
HERC2O95714 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
HERC2O95714 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HERC2O95714 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HERC2O95714 AC000123.3-201ENST00000624029 4975 ntBASIC1.11□□□□□ -2.23
HERC2O95714 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HERC2O95714 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.1□□□□□ -2.23
HERC2O95714 RPL21P71-201ENST00000465598 459 ntBASIC1.1□□□□□ -2.23
HERC2O95714 RPS3AP22-201ENST00000488297 769 ntBASIC1.1□□□□□ -2.23
HERC2O95714 FABP5P5-201ENST00000515537 406 ntBASIC1.1□□□□□ -2.23
HERC2O95714 COX6CP5-201ENST00000527162 228 ntBASIC1.1□□□□□ -2.23
HERC2O95714 AC015720.1-201ENST00000565251 277 ntBASIC1.1□□□□□ -2.23
HERC2O95714 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.1□□□□□ -2.23
HERC2O95714 MIR6733-201ENST00000635723 61 ntBASIC1.1□□□□□ -2.23
HERC2O95714 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HERC2O95714 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.1□□□□□ -2.23
HERC2O95714 RPS15AP6-201ENST00000420703 385 ntBASIC1.1□□□□□ -2.23
HERC2O95714 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.1□□□□□ -2.23
HERC2O95714 AC245517.2-201ENST00000442890 346 ntBASIC1.1□□□□□ -2.23
HERC2O95714 HMGB3P8-201ENST00000449709 577 ntBASIC1.1□□□□□ -2.23
HERC2O95714 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC1.1□□□□□ -2.23
HERC2O95714 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HERC2O95714 AL589743.1-201ENST00000551932 2712 ntBASIC1.1□□□□□ -2.23
HERC2O95714 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HERC2O95714 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
HERC2O95714 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.1□□□□□ -2.23
HERC2O95714 Z98749.2-208ENST00000381646 500 ntBASIC1.1□□□□□ -2.23
HERC2O95714 RPL21P3-201ENST00000395517 478 ntBASIC1.1□□□□□ -2.23
HERC2O95714 AL354695.1-201ENST00000427935 228 ntBASIC1.1□□□□□ -2.23
HERC2O95714 USP9YP8-201ENST00000441913 500 ntBASIC1.1□□□□□ -2.23
HERC2O95714 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.1□□□□□ -2.23
HERC2O95714 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.1□□□□□ -2.23
HERC2O95714 RNA5SP76-201ENST00000516277 87 ntBASIC1.1□□□□□ -2.23
HERC2O95714 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.1□□□□□ -2.23
HERC2O95714 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.1□□□□□ -2.23
HERC2O95714 AL049840.6-202ENST00000603373 279 ntBASIC1.1□□□□□ -2.23
HERC2O95714 AC120053.1-201ENST00000607706 736 ntBASIC1.1□□□□□ -2.23
HERC2O95714 MIR2909-201ENST00000617113 69 ntBASIC1.1□□□□□ -2.23
HERC2O95714 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.1□□□□□ -2.23
HERC2O95714 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HERC2O95714 RNU1-87P-201ENST00000363727 170 ntBASIC1.1□□□□□ -2.23
HERC2O95714 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.1□□□□□ -2.23
HERC2O95714 FABP5P3-201ENST00000437960 408 ntBASIC1.1□□□□□ -2.23
HERC2O95714 RPL23AP35-201ENST00000451906 501 ntBASIC1.1□□□□□ -2.23
HERC2O95714 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.1□□□□□ -2.23
HERC2O95714 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.1□□□□□ -2.23
HERC2O95714 AC109446.2-201ENST00000567872 497 ntBASIC1.1□□□□□ -2.23
HERC2O95714 AC135776.4-201ENST00000624300 1904 ntBASIC1.1□□□□□ -2.23
HERC2O95714 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HERC2O95714 MTCO1P48-201ENST00000448024 1096 ntBASIC1.09□□□□□ -2.23
HERC2O95714 AC125238.1-201ENST00000448842 249 ntBASIC1.09□□□□□ -2.23
HERC2O95714 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.09□□□□□ -2.23
HERC2O95714 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.09□□□□□ -2.23
HERC2O95714 AC024614.2-201ENST00000577584 372 ntBASIC1.09□□□□□ -2.23
HERC2O95714 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
HERC2O95714 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.09□□□□□ -2.23
HERC2O95714 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
HERC2O95714 ZNF876P-202ENST00000398732 1485 ntBASIC1.09□□□□□ -2.23
HERC2O95714 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.09□□□□□ -2.23
HERC2O95714 USP9YP15-201ENST00000442391 422 ntBASIC1.09□□□□□ -2.23
HERC2O95714 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HERC2O95714 LRRC34P2-201ENST00000514850 553 ntBASIC1.09□□□□□ -2.23
HERC2O95714 HMGB1P41-201ENST00000520234 440 ntBASIC1.09□□□□□ -2.23
HERC2O95714 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.09□□□□□ -2.23
HERC2O95714 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.09□□□□□ -2.23
HERC2O95714 SCN1A-220ENST00000641603 12506 ntBASIC1.09□□□□□ -2.23
HERC2O95714 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
HERC2O95714 MTND4P1-201ENST00000457501 1466 ntBASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms