Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCD1O75127 RNU6-64P-201ENST00000517119 105 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 AC134698.5-201ENST00000519444 336 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.98□□□□□ -1.45
PTCD1O75127 AP001804.3-201ENST00000525146 880 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 PTP4A1P6-201ENST00000531034 478 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 AP000763.2-201ENST00000540641 163 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCD1O75127 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.98□□□□□ -1.45
PTCD1O75127 AC007224.1-201ENST00000564410 144 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.98□□□□□ -1.45
PTCD1O75127 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCD1O75127 AC245389.1-201ENST00000605141 529 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCD1O75127 U2.22-201ENST00000636441 106 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCD1O75127 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCD1O75127 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.98□□□□□ -1.45
PTCD1O75127 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCD1O75127 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCD1O75127 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PTCD1O75127 SAMMSON-210ENST00000641260 1308 ntBASIC5.98□□□□□ -1.45
PTCD1O75127 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCD1O75127 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCD1O75127 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCD1O75127 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCD1O75127 RNU1-35P-201ENST00000362782 153 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 Y_RNA.378-201ENST00000365652 113 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 Y_RNA.395-201ENST00000383945 109 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 CISD1P1-201ENST00000393907 327 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 UBE2V1P2-201ENST00000397758 440 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 Z98745.1-201ENST00000402553 494 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 RNU4-14P-201ENST00000410858 122 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 RPL31P2-201ENST00000413849 377 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCD1O75127 RPS26P47-201ENST00000427219 348 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 RPS27AP12-201ENST00000429552 465 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCD1O75127 RPS17P13-201ENST00000448974 407 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCD1O75127 SCARNA10-201ENST00000459255 330 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 RN7SL303P-201ENST00000469773 251 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 AC012181.1-201ENST00000479895 423 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 RNU6-864P-201ENST00000516256 108 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 RNU6-1271P-201ENST00000517049 105 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCD1O75127 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCD1O75127 DEFB109D-201ENST00000529497 240 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 AC109635.4-202ENST00000531666 412 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 CYCSP29-201ENST00000533731 318 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCD1O75127 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.97□□□□□ -1.45
PTCD1O75127 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCD1O75127 MIR3942-201ENST00000585264 109 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCD1O75127 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCD1O75127 AL390240.1-201ENST00000612950 384 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 AC011155.2-201ENST00000623202 216 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCD1O75127 AL136164.3-201ENST00000624429 3978 ntBASIC5.97□□□□□ -1.45
PTCD1O75127 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PTCD1O75127 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCD1O75127 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PTCD1O75127 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCD1O75127 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PTCD1O75127 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PTCD1O75127 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
PTCD1O75127 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCD1O75127 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCD1O75127 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PTCD1O75127 RNU6-1252P-201ENST00000363054 104 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 Y_RNA.188-201ENST00000363952 111 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 RNU6-188P-201ENST00000364207 107 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 RNU6-432P-201ENST00000384196 109 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 ENSAP1-201ENST00000392855 326 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 MIR548F5-201ENST00000408421 86 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 RNA5SP107-201ENST00000411358 122 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 RNU6-516P-201ENST00000411381 104 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 RPS29P17-201ENST00000430795 166 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCD1O75127 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCD1O75127 RPL23AP93-201ENST00000440847 484 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 RPL32P28-201ENST00000443577 397 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 AC016696.1-201ENST00000446949 318 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 NUTF2P3-201ENST00000448540 384 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 AC107399.1-201ENST00000451226 265 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 RPS24P6-201ENST00000452670 400 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCD1O75127 AC073073.1-201ENST00000493920 463 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 AC015795.1-201ENST00000513669 327 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 AC105031.1-201ENST00000518550 476 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCD1O75127 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTCD1O75127 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCD1O75127 AC063950.1-201ENST00000552036 308 ntBASIC5.96□□□□□ -1.46
PTCD1O75127 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCD1O75127 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCD1O75127 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms