Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 AL512326.1-201ENST00000443050 721 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 NPM1P49-201ENST00000448027 714 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 AC006480.1-201ENST00000449887 378 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 RPS7P7-201ENST00000463499 571 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 PRDX4P1-201ENST00000507189 574 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 RNA5SP315-201ENST00000516340 116 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 RNA5SP312-201ENST00000517068 116 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 AC093012.1-202ENST00000549403 582 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 AF038458.1-201ENST00000588406 262 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 Z84480.1-201ENST00000605131 311 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 AC104458.1-201ENST00000608243 463 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA12O60330 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA12O60330 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
PCDHGA12O60330 GABPAP-201ENST00000419271 1356 ntBASIC4.4□□□□□ -1.7
PCDHGA12O60330 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PCDHGA12O60330 AL137003.2-201ENST00000606924 2538 ntBASIC4.4□□□□□ -1.7
PCDHGA12O60330 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHGA12O60330 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHGA12O60330 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDHGA12O60330 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA12O60330 Y_RNA.159-201ENST00000363674 87 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 SNORA23-201ENST00000365128 182 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 RNU1-13P-201ENST00000384499 162 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 RNU6-606P-201ENST00000384721 111 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC097374.1-203ENST00000400783 485 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 HDGFP1-201ENST00000405943 252 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 RPS3AP24-201ENST00000407896 734 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 MTND4LP11-201ENST00000422184 280 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 MTCO1P39-201ENST00000426148 480 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 USP9YP7-201ENST00000436723 430 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 USP9YP32-201ENST00000452432 430 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 RPS24P6-201ENST00000452670 400 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 snoU13.24-201ENST00000458998 104 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 RPL36AP51-201ENST00000487216 318 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 FCF1P3-201ENST00000496394 590 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 SCARNA24.1-201ENST00000516465 137 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC104383.1-201ENST00000530297 370 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC109635.4-202ENST00000531666 412 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 OR8R1P-201ENST00000543943 764 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC125611.2-201ENST00000551907 647 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC234778.2-201ENST00000566241 354 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 MTCO3P24-201ENST00000572729 782 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 BNIP3P22-201ENST00000593399 556 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AL591034.3-201ENST00000605511 685 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AP002360.4-201ENST00000606980 481 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC008536.2-201ENST00000607284 349 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AL353748.2-201ENST00000622148 471 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AL136313.1-201ENST00000624804 202 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA12O60330 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA12O60330 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA12O60330 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC116096.1-201ENST00000566804 2314 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PCDHGA12O60330 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA12O60330 EXOC5P1-201ENST00000510543 1969 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AL133243.3-201ENST00000617415 3004 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 AC092326.2-201ENST00000624772 1561 ntBASIC4.4□□□□□ -1.71
PCDHGA12O60330 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHGA12O60330 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA12O60330 AL157700.1-201ENST00000561973 1432 ntBASIC4.39□□□□□ -1.71
PCDHGA12O60330 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHGA12O60330 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA12O60330 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA12O60330 MIR383-201ENST00000362257 73 ntBASIC4.39□□□□□ -1.71
PCDHGA12O60330 RNU6-960P-201ENST00000364056 120 ntBASIC4.39□□□□□ -1.71
PCDHGA12O60330 RN7SKP280-201ENST00000364196 304 ntBASIC4.39□□□□□ -1.71
PCDHGA12O60330 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA12O60330 RNU6-76P-201ENST00000384060 104 ntBASIC4.39□□□□□ -1.71
PCDHGA12O60330 RNU6-629P-201ENST00000384061 103 ntBASIC4.39□□□□□ -1.71
PCDHGA12O60330 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHGA12O60330 RPL32P23-201ENST00000397237 405 ntBASIC4.39□□□□□ -1.71
PCDHGA12O60330 MRPL50P2-201ENST00000416821 482 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms