Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.32□□□□□ -1.72
FOXS1O43638 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
FOXS1O43638 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXS1O43638 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXS1O43638 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FOXS1O43638 MTND5P28-201ENST00000438005 1594 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXS1O43638 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
FOXS1O43638 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXS1O43638 MTND4P1-201ENST00000457501 1466 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
FOXS1O43638 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXS1O43638 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXS1O43638 AC006484.1-201ENST00000435086 1884 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 RNU6-511P-201ENST00000363496 107 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 Y_RNA.148-201ENST00000363557 117 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 Y_RNA.378-201ENST00000365652 113 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 RNU6-1293P-201ENST00000384077 107 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 MT-TR-201ENST00000387439 65 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
FOXS1O43638 SDHCP2-201ENST00000398565 501 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 MIR1271-201ENST00000408537 86 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXS1O43638 AL590609.2-201ENST00000421430 368 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXS1O43638 RPL7AP25-201ENST00000423357 805 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXS1O43638 DNAJC19P7-201ENST00000428811 344 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AL031584.1-201ENST00000447169 754 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AC022431.1-201ENST00000450941 438 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 DHFRP3-201ENST00000455595 559 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 SNRPFP3-201ENST00000457792 225 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 Y_RNA.654-201ENST00000497848 106 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 RN7SKP24-201ENST00000515888 284 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 RNU6-1038P-201ENST00000516516 104 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 RNU6-273P-201ENST00000516937 96 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 HMGB1P41-201ENST00000520234 440 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 MTND4P7-201ENST00000523876 130 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AP000827.1-201ENST00000527814 258 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AC109635.4-202ENST00000531666 412 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXS1O43638 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXS1O43638 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.31□□□□□ -1.72
FOXS1O43638 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXS1O43638 COX6CP3-201ENST00000580869 223 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 MIR4472-2-201ENST00000582069 67 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 MIR5690-201ENST00000583739 73 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.31□□□□□ -1.72
FOXS1O43638 AC022893.3-201ENST00000607665 437 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AL442067.1-201ENST00000613261 223 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
FOXS1O43638 RNU6-156P-201ENST00000621869 107 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 AC010266.2-201ENST00000564741 3255 ntBASIC4.31□□□□□ -1.72
FOXS1O43638 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXS1O43638 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXS1O43638 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXS1O43638 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXS1O43638 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXS1O43638 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
FOXS1O43638 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.31□□□□□ -1.72
FOXS1O43638 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
FOXS1O43638 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXS1O43638 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXS1O43638 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXS1O43638 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXS1O43638 RPL32P3-201ENST00000359025 275 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 SNORD113-7-201ENST00000363762 77 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 Y_RNA.212-201ENST00000364177 102 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXS1O43638 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
FOXS1O43638 RNU6-641P-201ENST00000384006 107 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 MIR92A2-201ENST00000385299 75 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 MT-TG-201ENST00000387429 68 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
FOXS1O43638 RNU6-985P-201ENST00000410182 104 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 AC069218.2-201ENST00000411665 344 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 RPS12P24-201ENST00000412619 387 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 AC009302.1-201ENST00000417147 390 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 RPL31P12-201ENST00000422587 358 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 Z74021.1-201ENST00000423610 407 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 FTLP19-201ENST00000433300 394 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXS1O43638 AF228730.2-201ENST00000438784 848 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 AL731563.1-201ENST00000442202 214 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 RAC1P7-201ENST00000445367 377 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXS1O43638 BTF3P15-201ENST00000455606 336 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 AC006511.1-201ENST00000470614 315 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXS1O43638 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXS1O43638 AC017037.2-201ENST00000513850 890 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 RNU2-10P-201ENST00000516375 211 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 RNU7-51P-201ENST00000516560 62 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 RNA5SP454-201ENST00000517231 127 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 RN7SKP295-201ENST00000517264 153 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXS1O43638 AC009902.1-201ENST00000519351 183 ntBASIC4.3□□□□□ -1.72
FOXS1O43638 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXS1O43638 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.3□□□□□ -1.72
FOXS1O43638 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms