Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL591034.1-201ENST00000407447 340 ntBASIC3.47□□□□□ -1.85
TO15178 SNORA57.3-201ENST00000411095 141 ntBASIC3.47□□□□□ -1.85
TO15178 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.47□□□□□ -1.85
TO15178 NPM1P11-201ENST00000417106 855 ntBASIC3.47□□□□□ -1.85
TO15178 CCDC58P2-201ENST00000417131 366 ntBASIC3.47□□□□□ -1.85
TO15178 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.47□□□□□ -1.85
TO15178 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.47□□□□□ -1.85
TO15178 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.47□□□□□ -1.85
TO15178 AC129850.1-201ENST00000436203 508 ntBASIC3.47□□□□□ -1.85
TO15178 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.47□□□□□ -1.85
TO15178 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.47□□□□□ -1.85
TO15178 AC118469.1-201ENST00000442943 488 ntBASIC3.47□□□□□ -1.85
TO15178 KATNBL1P3-201ENST00000443475 909 ntBASIC3.47□□□□□ -1.85
TO15178 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.47□□□□□ -1.85
TO15178 AC234775.1-201ENST00000454247 670 ntBASIC3.47□□□□□ -1.85
TO15178 AP1S2P1-201ENST00000457344 379 ntBASIC3.47□□□□□ -1.85
TO15178 UBDP1-202ENST00000457888 382 ntBASIC3.47□□□□□ -1.85
TO15178 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.47□□□□□ -1.85
TO15178 RN7SL93P-201ENST00000463035 293 ntBASIC3.47□□□□□ -1.85
TO15178 RPS23P3-201ENST00000470993 430 ntBASIC3.47□□□□□ -1.85
TO15178 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.47□□□□□ -1.85
TO15178 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.47□□□□□ -1.85
TO15178 AC004069.2-201ENST00000505438 1114 ntBASIC3.47□□□□□ -1.85
TO15178 BTF3L4P4-201ENST00000506381 449 ntBASIC3.47□□□□□ -1.85
TO15178 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.47□□□□□ -1.85
TO15178 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.47□□□□□ -1.85
TO15178 AC116347.2-201ENST00000514912 523 ntBASIC3.47□□□□□ -1.85
TO15178 RN7SKP209-201ENST00000516888 304 ntBASIC3.47□□□□□ -1.85
TO15178 RNU6-528P-201ENST00000516926 100 ntBASIC3.47□□□□□ -1.85
TO15178 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.47□□□□□ -1.85
TO15178 ACTR3BP3-201ENST00000565577 979 ntBASIC3.47□□□□□ -1.85
TO15178 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.47□□□□□ -1.85
TO15178 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.47□□□□□ -1.85
TO15178 MIR3186-201ENST00000577404 85 ntBASIC3.47□□□□□ -1.85
TO15178 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.47□□□□□ -1.85
TO15178 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.47□□□□□ -1.85
TO15178 TPMTP1-201ENST00000592307 737 ntBASIC3.47□□□□□ -1.85
TO15178 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.47□□□□□ -1.85
TO15178 AL031985.2-201ENST00000600955 480 ntBASIC3.47□□□□□ -1.85
TO15178 AC091965.4-201ENST00000607691 587 ntBASIC3.47□□□□□ -1.85
TO15178 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
TO15178 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
TO15178 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TO15178 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.47□□□□□ -1.85
TO15178 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TO15178 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.46□□□□□ -1.85
TO15178 MFSD8-236ENST00000641509 4050 ntBASIC3.46□□□□□ -1.85
TO15178 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.46□□□□□ -1.86
TO15178 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TO15178 CCT4P2-201ENST00000233836 1548 ntBASIC3.46□□□□□ -1.86
TO15178 MTCO1P9-201ENST00000505577 1534 ntBASIC3.46□□□□□ -1.86
TO15178 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
TO15178 AC005183.1-201ENST00000603687 1979 ntBASIC3.46□□□□□ -1.86
TO15178 FRG1BP-201ENST00000278882 761 ntBASIC3.46□□□□□ -1.86
TO15178 RNU5F-6P-201ENST00000362979 116 ntBASIC3.46□□□□□ -1.86
TO15178 RNU1-64P-201ENST00000365443 163 ntBASIC3.46□□□□□ -1.86
TO15178 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.46□□□□□ -1.86
TO15178 SNORD116-9-201ENST00000384000 95 ntBASIC3.46□□□□□ -1.86
TO15178 SNORD116-3-201ENST00000384287 95 ntBASIC3.46□□□□□ -1.86
TO15178 SNORD116-1-201ENST00000384335 95 ntBASIC3.46□□□□□ -1.86
TO15178 SNORD116-7-201ENST00000384404 95 ntBASIC3.46□□□□□ -1.86
TO15178 SNORD116-5-201ENST00000384462 95 ntBASIC3.46□□□□□ -1.86
TO15178 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
TO15178 HMGN2P8-201ENST00000391458 268 ntBASIC3.46□□□□□ -1.86
TO15178 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TO15178 RN7SKP159-201ENST00000410657 292 ntBASIC3.46□□□□□ -1.86
TO15178 AL359704.1-201ENST00000411586 781 ntBASIC3.46□□□□□ -1.86
TO15178 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.46□□□□□ -1.86
TO15178 RPL17P12-201ENST00000413391 526 ntBASIC3.46□□□□□ -1.86
TO15178 HMGB3P23-201ENST00000414981 585 ntBASIC3.46□□□□□ -1.86
TO15178 AL365338.1-201ENST00000422282 858 ntBASIC3.46□□□□□ -1.86
TO15178 AC244035.1-201ENST00000430042 390 ntBASIC3.46□□□□□ -1.86
TO15178 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.46□□□□□ -1.86
TO15178 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.46□□□□□ -1.86
TO15178 HIGD1AP11-201ENST00000438361 280 ntBASIC3.46□□□□□ -1.86
TO15178 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.46□□□□□ -1.86
TO15178 RPL17P49-201ENST00000443728 411 ntBASIC3.46□□□□□ -1.86
TO15178 DNAJC19P1-201ENST00000455312 319 ntBASIC3.46□□□□□ -1.86
TO15178 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.46□□□□□ -1.86
TO15178 RPL31P3-201ENST00000458430 332 ntBASIC3.46□□□□□ -1.86
TO15178 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.46□□□□□ -1.86
TO15178 RNA5SP208-201ENST00000516156 78 ntBASIC3.46□□□□□ -1.86
TO15178 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.46□□□□□ -1.86
TO15178 AC025881.1-201ENST00000518851 512 ntBASIC3.46□□□□□ -1.86
TO15178 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.46□□□□□ -1.86
TO15178 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.46□□□□□ -1.86
TO15178 AC106785.1-201ENST00000565935 262 ntBASIC3.46□□□□□ -1.86
TO15178 AC083760.1-201ENST00000589621 670 ntBASIC3.46□□□□□ -1.86
TO15178 AC073114.1-201ENST00000612027 490 ntBASIC3.46□□□□□ -1.86
TO15178 AC008121.2-201ENST00000614647 523 ntBASIC3.46□□□□□ -1.86
TO15178 AL161637.1-201ENST00000622380 412 ntBASIC3.46□□□□□ -1.86
TO15178 AC091905.1-201ENST00000624400 311 ntBASIC3.46□□□□□ -1.86
TO15178 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.46□□□□□ -1.86
TO15178 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TO15178 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TO15178 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
TO15178 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.46□□□□□ -1.86
TO15178 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TO15178 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TO15178 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms