Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.1□□□□□ -1.75
NPC1O15118 RPS3AP44-201ENST00000425466 790 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AL358472.1-201ENST00000431295 329 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 Z74696.2-201ENST00000436514 498 ntBASIC4.1□□□□□ -1.75
NPC1O15118 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1O15118 HLA-N-201ENST00000437516 135 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AC073614.1-201ENST00000438690 650 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 RPS29P7-201ENST00000439662 171 ntBASIC4.1□□□□□ -1.75
NPC1O15118 RPL17P49-201ENST00000443728 411 ntBASIC4.1□□□□□ -1.75
NPC1O15118 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.1□□□□□ -1.75
NPC1O15118 AC007967.1-201ENST00000455422 1159 ntBASIC4.1□□□□□ -1.75
NPC1O15118 RN7SL542P-201ENST00000467147 294 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AC138853.1-201ENST00000503549 823 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 SNORA67.7-201ENST00000516664 135 ntBASIC4.1□□□□□ -1.75
NPC1O15118 RNU7-143P-201ENST00000516781 65 ntBASIC4.1□□□□□ -1.75
NPC1O15118 SNORA18.6-201ENST00000516792 115 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AC023632.4-201ENST00000517783 191 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.1□□□□□ -1.75
NPC1O15118 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.1□□□□□ -1.75
NPC1O15118 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1O15118 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1O15118 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.1□□□□□ -1.75
NPC1O15118 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.1□□□□□ -1.75
NPC1O15118 AC009063.1-201ENST00000563342 702 ntBASIC4.1□□□□□ -1.75
NPC1O15118 MIR3158-1-201ENST00000583596 81 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AL021997.1-201ENST00000605757 193 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AC098614.4-201ENST00000607601 462 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AL031666.3-201ENST00000609320 1006 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AC103710.1-201ENST00000610003 901 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AC091834.1-201ENST00000614543 472 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AC006133.1-201ENST00000617106 264 ntBASIC4.1□□□□□ -1.75
NPC1O15118 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AC012150.2-201ENST00000621300 544 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AL354798.1-201ENST00000622505 329 ntBASIC4.1□□□□□ -1.75
NPC1O15118 AL159972.1-201ENST00000625150 448 ntBASIC4.1□□□□□ -1.75
NPC1O15118 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1O15118 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1O15118 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1O15118 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
NPC1O15118 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1O15118 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.1□□□□□ -1.75
NPC1O15118 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPC1O15118 TAB3P1-202ENST00000452645 1634 ntBASIC4.1□□□□□ -1.75
NPC1O15118 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1O15118 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.09□□□□□ -1.75
NPC1O15118 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1O15118 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1O15118 DDX10P1-201ENST00000448545 1933 ntBASIC4.09□□□□□ -1.75
NPC1O15118 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1O15118 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
NPC1O15118 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1O15118 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1O15118 AL138713.1-201ENST00000624026 2130 ntBASIC4.09□□□□□ -1.75
NPC1O15118 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1O15118 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPC1O15118 AL359837.1-201ENST00000381357 287 ntBASIC4.09□□□□□ -1.75
NPC1O15118 RNU6-278P-201ENST00000390945 109 ntBASIC4.09□□□□□ -1.75
NPC1O15118 LAP3P1-201ENST00000403648 294 ntBASIC4.09□□□□□ -1.75
NPC1O15118 CCNG1P1-201ENST00000406783 885 ntBASIC4.09□□□□□ -1.75
NPC1O15118 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.09□□□□□ -1.75
NPC1O15118 RNU4-65P-201ENST00000410473 140 ntBASIC4.09□□□□□ -1.75
NPC1O15118 RNU2-71P-201ENST00000411395 189 ntBASIC4.09□□□□□ -1.75
NPC1O15118 SSXP9-201ENST00000417503 292 ntBASIC4.09□□□□□ -1.75
NPC1O15118 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1O15118 MTCO1P39-201ENST00000426148 480 ntBASIC4.09□□□□□ -1.75
NPC1O15118 AC104651.1-201ENST00000427559 735 ntBASIC4.09□□□□□ -1.75
NPC1O15118 USP9YP28-201ENST00000435142 589 ntBASIC4.09□□□□□ -1.75
NPC1O15118 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1O15118 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1O15118 TPT1P14-201ENST00000448018 505 ntBASIC4.09□□□□□ -1.75
NPC1O15118 AC108059.3-201ENST00000456388 214 ntBASIC4.09□□□□□ -1.75
NPC1O15118 RNU7-59P-201ENST00000459101 61 ntBASIC4.09□□□□□ -1.75
NPC1O15118 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.09□□□□□ -1.75
NPC1O15118 RPS3AP50-201ENST00000487064 803 ntBASIC4.09□□□□□ -1.75
NPC1O15118 RPL37P25-201ENST00000507308 276 ntBASIC4.09□□□□□ -1.75
NPC1O15118 PPBPP1-201ENST00000510807 373 ntBASIC4.09□□□□□ -1.75
NPC1O15118 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
NPC1O15118 MYL12AP1-201ENST00000518490 515 ntBASIC4.09□□□□□ -1.75
NPC1O15118 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1O15118 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.09□□□□□ -1.75
NPC1O15118 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NPC1O15118 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.09□□□□□ -1.75
NPC1O15118 AP003122.4-201ENST00000530980 758 ntBASIC4.09□□□□□ -1.75
NPC1O15118 OR5D17P-201ENST00000531492 978 ntBASIC4.09□□□□□ -1.75
NPC1O15118 AL133271.1-201ENST00000538229 291 ntBASIC4.09□□□□□ -1.75
NPC1O15118 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1O15118 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1O15118 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.09□□□□□ -1.75
NPC1O15118 AC010546.1-201ENST00000569391 485 ntBASIC4.09□□□□□ -1.75
NPC1O15118 AL121834.1-201ENST00000572284 509 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms