Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MTCO1P45-201ENST00000431457 267 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 GTF2IP20-201ENST00000431663 360 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 RPS15AP28-201ENST00000435088 386 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AL353689.1-201ENST00000438895 199 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 EEF1B2P7-201ENST00000451177 676 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC118465.1-201ENST00000513820 1271 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 SNORA31.13-201ENST00000516624 135 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 SNORA48.10-201ENST00000516965 160 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC067904.2-201ENST00000517322 1283 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC022880.1-201ENST00000534017 973 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC243972.3-201ENST00000539655 198 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 ARL6IP1P1-201ENST00000545836 610 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AL049838.1-201ENST00000563647 981 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 MIR4299-201ENST00000577899 72 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 AC078899.2-201ENST00000595282 212 ntBASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.16□□□□□ -2.22
CHKB-CPT1BH3BT56 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CHKB-CPT1BH3BT56 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC1.15□□□□□ -2.22
CHKB-CPT1BH3BT56 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.22
CHKB-CPT1BH3BT56 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 OR5H15-201ENST00000383696 930 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 SNORA67.4-201ENST00000384688 142 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 UBA52P6-201ENST00000399822 382 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AL136372.1-201ENST00000403060 228 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 RNA5SP270-201ENST00000411361 118 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 EIF4EP4-201ENST00000424916 578 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 HSPE1P21-201ENST00000438283 308 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC016691.1-201ENST00000441321 413 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 RPL7P12-201ENST00000446719 750 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 Z75741.1-201ENST00000446793 314 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 RPL23AP15-201ENST00000450202 459 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 snoU109.1-201ENST00000459339 135 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC104629.2-201ENST00000468627 598 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC026427.2-201ENST00000506228 536 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC006499.2-201ENST00000513470 337 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 RN7SKP132-201ENST00000516001 208 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 SCARNA11.3-201ENST00000517276 130 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC021269.2-201ENST00000532318 330 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC007458.1-201ENST00000542812 373 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 DEFB122-202ENST00000569013 197 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC024614.2-201ENST00000577584 372 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC005034.5-201ENST00000604219 466 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC106052.1-201ENST00000608029 497 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC107294.1-201ENST00000609524 467 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 MIR6766-201ENST00000622641 72 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AL160394.1-201ENST00000624765 724 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC012442.3-202ENST00000636742 206 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AP003399.1-201ENST00000637534 361 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 ELF2P3-201ENST00000445099 1506 ntBASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC1.15□□□□□ -2.23
CHKB-CPT1BH3BT56 AC008555.8-201ENST00000623602 2168 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-98P-201ENST00000384173 107 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU1-148P-201ENST00000384472 162 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-821P-201ENST00000390995 107 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AL138885.1-201ENST00000405921 675 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 RNU6-1328P-201ENST00000410938 106 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 CYCSP48-201ENST00000417124 323 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC005005.2-201ENST00000420779 380 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC069157.1-201ENST00000421749 137 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC090774.1-201ENST00000435925 246 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC124916.1-201ENST00000444020 547 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 Z82190.1-201ENST00000454534 490 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 PPP1R2P5-201ENST00000457256 603 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AL121769.1-201ENST00000469473 401 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 BZW1P2-201ENST00000473537 826 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 AC026801.1-201ENST00000497178 464 ntBASIC1.14□□□□□ -2.23
CHKB-CPT1BH3BT56 PCNAP1-201ENST00000505363 709 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms