Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 AL121992.2-201ENST00000606262 256 ntBASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 MTND5P30-201ENST00000452896 1731 ntBASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 AL672167.1-205ENST00000641112 3080 ntBASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.82□□□□□ -1.64
CNOT6Q9ULM6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC009643.2-201ENST00000603543 1448 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 RNU6-552P-201ENST00000362869 119 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 RNU6-317P-201ENST00000384031 107 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 RNU6-310P-201ENST00000384655 107 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 U3.30-201ENST00000391308 210 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 ARF4P3-201ENST00000397387 509 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AL031679.1-201ENST00000400616 525 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 RPL6P29-201ENST00000414863 865 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 RPL7P10-201ENST00000417407 739 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC006466.1-201ENST00000438721 289 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC108751.2-201ENST00000469993 231 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 RPL7P43-201ENST00000478876 753 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC090453.1-201ENST00000495560 436 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 TRBVA-201ENST00000498804 316 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC110794.1-201ENST00000505816 425 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 RNA5SP360-201ENST00000516555 118 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 RNU6-635P-201ENST00000516651 102 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AL391358.1-201ENST00000605342 190 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC018889.1-201ENST00000605372 397 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC107871.2-201ENST00000612894 502 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC100827.5-201ENST00000615883 426 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC078938.1-201ENST00000620993 318 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 OR52H1-202ENST00000641796 1061 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 DDX18P4-201ENST00000511690 1966 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AL049641.1-201ENST00000441055 1948 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AC032011.1-201ENST00000611703 1549 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 MAPK10-349ENST00000641767 3661 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 AL451142.2-201ENST00000429076 2090 ntBASIC4.81□□□□□ -1.64
CNOT6Q9ULM6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AC074029.4-201ENST00000624796 1859 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 RNU6-1252P-201ENST00000363054 104 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 RNU6-238P-201ENST00000363313 106 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 RN7SKP103-201ENST00000363848 320 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 Y_RNA.378-201ENST00000365652 113 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AL139397.2-201ENST00000404529 772 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 Y_RNA.646-201ENST00000410980 101 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 RN7SKP100-201ENST00000411258 284 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 CKS1BP6-201ENST00000424932 240 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 RPS24P8-201ENST00000431490 402 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AL031663.1-201ENST00000437445 219 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 H2AFZP6-201ENST00000444403 394 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AC020550.1-201ENST00000447385 163 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 RPL5P30-201ENST00000465511 891 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 AL049714.1-201ENST00000466686 347 ntBASIC4.8□□□□□ -1.64
CNOT6Q9ULM6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms