Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 MFSD8-233ENST00000641482 4860 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 AL356274.2-201ENST00000624379 3752 ntBASIC3.74□□□□□ -1.81
SIX4Q9UIU6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SIX4Q9UIU6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 RNA5SP235-201ENST00000365411 114 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 Y_RNA.517-201ENST00000384551 106 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AL035410.1-201ENST00000427409 427 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AL031667.1-201ENST00000440222 725 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 ARPC3P5-201ENST00000448802 534 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 MTND1P27-201ENST00000451117 902 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 SSXP1-201ENST00000453640 473 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 RPL31P50-201ENST00000471002 296 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC011825.1-201ENST00000484967 388 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 FCF1P3-201ENST00000496394 590 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 ARL2BPP4-201ENST00000506854 471 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 SLC25A15P5-201ENST00000508033 253 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AF131216.2-201ENST00000512316 564 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC116347.2-201ENST00000514912 523 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 RNU2-27P-201ENST00000516185 142 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 RNA5SP309-201ENST00000516670 106 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 IGKV2-26-201ENST00000518305 343 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 MIR544B-201ENST00000582372 78 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC015871.2-201ENST00000603605 948 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AL136363.2-201ENST00000604173 851 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AL021997.1-201ENST00000605757 193 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC015540.1-201ENST00000615828 501 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AC073968.1-201ENST00000618594 637 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 AL645937.1-201ENST00000641739 1652 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 NMD3P1-201ENST00000439704 1488 ntBASIC3.73□□□□□ -1.81
SIX4Q9UIU6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX4Q9UIU6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 RNU6-348P-201ENST00000384386 107 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 MIR320C1-201ENST00000408566 88 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC004987.3-201ENST00000413879 771 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 RPL31P45-201ENST00000419532 356 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC002075.2-201ENST00000425207 252 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AL445669.1-201ENST00000426743 755 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 RPL7P28-201ENST00000437739 740 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 RPS29P31-201ENST00000446147 164 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 PRDX3P3-201ENST00000447765 522 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC005297.2-201ENST00000450430 606 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 USP9YP34-201ENST00000453983 808 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 BTF3P5-201ENST00000457252 467 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 PLGLA-201ENST00000465668 449 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 PABPC1P3-201ENST00000469174 459 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC021678.1-201ENST00000505195 936 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 POU5F1P7-201ENST00000508759 541 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 FABP5P5-201ENST00000515537 406 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 RNU6-720P-201ENST00000516363 108 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 HSPA8P13-201ENST00000523715 472 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC068587.4-201ENST00000533893 186 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 MIR5186-201ENST00000577504 120 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC073648.5-201ENST00000603502 305 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 PRELID3BP8-201ENST00000604148 295 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX4Q9UIU6 BCRP9-201ENST00000605312 388 ntBASIC3.72□□□□□ -1.81
SIX4Q9UIU6 AC090186.1-201ENST00000605991 572 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms