Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC127537.2-201ENST00000439258 465 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 CDC27P1-201ENST00000445384 715 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 EPS15P1-201ENST00000448836 336 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 BX322784.1-201ENST00000455793 1077 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 HMGN2P16-201ENST00000456802 261 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC068724.1-201ENST00000487100 792 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 HMGB1P36-201ENST00000487709 576 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 OR2A20P-203ENST00000498397 1268 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC106038.2-201ENST00000520706 568 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC087276.1-201ENST00000529659 480 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC025884.1-201ENST00000556034 378 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 HSPE1P3-201ENST00000559254 309 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 MIR3939-201ENST00000582614 106 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 U73023.1-201ENST00000603134 700 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AL009028.1-201ENST00000604895 802 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AL031775.1-201ENST00000607014 887 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AL513477.2-201ENST00000607858 568 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AL591516.1-201ENST00000611326 274 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AL161637.1-201ENST00000622380 412 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 Z69908.1-201ENST00000622603 247 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 CYP3A51P-201ENST00000633513 256 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 MTND5P19-201ENST00000424872 1794 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 AC011978.2-201ENST00000569835 2054 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 FAM91A3P-201ENST00000456826 2544 ntBASIC3.24□□□□□ -1.89
NDE1Q9NXR1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
NDE1Q9NXR1 PABPC1P9-201ENST00000426076 1612 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AL672167.1-206ENST00000356293 943 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 RNU6-343P-201ENST00000364709 104 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 MIR607-201ENST00000385241 96 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 RPL7P60-201ENST00000397636 735 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 RN7SKP111-201ENST00000410349 271 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 RPL23AP39-201ENST00000415533 405 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC083875.1-201ENST00000419509 405 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 BX119904.4-201ENST00000424402 301 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 UBE2FP3-201ENST00000436366 524 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC115115.1-201ENST00000449927 248 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 RPL36AP33-201ENST00000450395 310 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 UQCRHP3-201ENST00000451503 251 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 USP9YP34-201ENST00000453983 808 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 RPL31P3-201ENST00000458430 332 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 RPL7P19-201ENST00000469948 618 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC017015.1-201ENST00000477387 286 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 MTCO1P35-201ENST00000515270 228 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 RN7SKP244-201ENST00000516513 307 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC024224.1-201ENST00000538284 609 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC055876.1-202ENST00000567053 138 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC136618.2-201ENST00000575091 400 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 MIR3690-201ENST00000580266 75 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AL109618.2-201ENST00000605527 211 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 MIR7851-201ENST00000610611 160 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.23□□□□□ -1.89
NDE1Q9NXR1 AC127502.3-201ENST00000636170 1206 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms