Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC004825.2-201ENST00000616634 455 ntBASIC4.25□□□□□ -1.73
VPS45Q9NRW7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS45Q9NRW7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS45Q9NRW7 AC099654.12-201ENST00000639868 649 ntBASIC4.25□□□□□ -1.73
VPS45Q9NRW7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS45Q9NRW7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
VPS45Q9NRW7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS45Q9NRW7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VPS45Q9NRW7 AL645937.1-201ENST00000641739 1652 ntBASIC4.25□□□□□ -1.73
VPS45Q9NRW7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
VPS45Q9NRW7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VPS45Q9NRW7 AL133383.2-201ENST00000622958 2336 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC008725.1-201ENST00000605123 2263 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 MIR483-201ENST00000385070 76 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 Y_RNA.582-201ENST00000391023 95 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AL137014.1-201ENST00000420490 1226 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC104651.1-201ENST00000427559 735 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 FTH1P6-201ENST00000430768 320 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AL022238.1-201ENST00000442557 355 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 RPL7P36-201ENST00000444633 681 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AL353691.1-201ENST00000451332 387 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 MTND1P9-201ENST00000453775 944 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 BTF3P5-201ENST00000457252 467 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC023424.2-201ENST00000493479 777 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC112204.1-201ENST00000502591 103 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC026726.1-201ENST00000512859 601 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 OR4P1P-201ENST00000530808 1136 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC016957.1-201ENST00000534895 309 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC007424.1-203ENST00000554613 687 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AL360157.1-201ENST00000565962 87 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 HMGB1P50-201ENST00000605814 607 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC138749.5-201ENST00000611461 208 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC013476.2-201ENST00000614456 459 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC116165.2-201ENST00000616705 206 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC104010.1-201ENST00000616889 150 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AC012442.3-202ENST00000636742 206 ntBASIC4.24□□□□□ -1.73
VPS45Q9NRW7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS45Q9NRW7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 RNU6-1155P-201ENST00000363554 107 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 RNU5A-6P-201ENST00000384136 116 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 SNORA11.2-201ENST00000408318 127 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 HMGB3P23-201ENST00000414981 585 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AC127526.1-201ENST00000417526 366 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 MTATP6P13-201ENST00000438531 667 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AL138799.3-201ENST00000438968 350 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AP000542.1-201ENST00000448473 371 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AL500522.2-201ENST00000448562 343 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 MTCO1P42-201ENST00000457379 726 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 snoU13.8-201ENST00000458890 104 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 RPL21P104-201ENST00000464143 478 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 RPS4XP10-201ENST00000465034 731 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 SCARNA13-201ENST00000516672 275 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 SNORA31.20-201ENST00000517111 133 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 OR5G4P-201ENST00000525251 760 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 OR5D17P-201ENST00000531492 978 ntBASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS45Q9NRW7 AC008250.2-201ENST00000615261 205 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms