Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSU72Q9NP77 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 MIR1273E-201ENST00000581165 102 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 AC104687.2-201ENST00000604442 342 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 AC107871.2-201ENST00000612894 502 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSU72Q9NP77 GABPAP-201ENST00000419271 1356 ntBASIC5.02□□□□□ -1.61
SSU72Q9NP77 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.02□□□□□ -1.61
SSU72Q9NP77 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSU72Q9NP77 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSU72Q9NP77 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSU72Q9NP77 RNU6-238P-201ENST00000363313 106 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 RNVU1-3-201ENST00000364313 161 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSU72Q9NP77 RNU6-637P-201ENST00000384050 107 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 NDUFS5P1-201ENST00000405668 289 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 RPLP0P7-201ENST00000416050 667 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 RPS15AP40-201ENST00000419621 391 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AL139095.3-201ENST00000419672 1203 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AC236972.1-201ENST00000433225 199 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 RPL10P17-201ENST00000453852 316 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 SETP20-201ENST00000457046 852 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AL133445.1-201ENST00000467051 452 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 HMGB1P25-201ENST00000468402 607 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AC087385.1-201ENST00000475062 312 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 RN7SL799P-201ENST00000475891 298 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AL117692.1-201ENST00000494283 713 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SSU72Q9NP77 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 RANP3-201ENST00000530970 276 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 OR1F2P-201ENST00000570470 933 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 MIR3941-201ENST00000582572 103 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AC006272.2-201ENST00000594725 163 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AC087783.2-201ENST00000605070 562 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AC004696.1-201ENST00000614345 607 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 ATP5A1P2-202ENST00000616464 443 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 PISRT1.1-201ENST00000616930 107 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 MIR6813-201ENST00000621638 56 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 AC073592.6-201ENST00000624271 415 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SSU72Q9NP77 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SSU72Q9NP77 AL158163.1-201ENST00000603915 1649 ntBASIC5.01□□□□□ -1.61
SSU72Q9NP77 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSU72Q9NP77 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSU72Q9NP77 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSU72Q9NP77 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
SSU72Q9NP77 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SSU72Q9NP77 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSU72Q9NP77 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5□□□□□ -1.61
SSU72Q9NP77 RNU6-490P-201ENST00000362985 107 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 SNORA66-201ENST00000384792 133 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 U3.35-201ENST00000408405 208 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 RPL21P24-201ENST00000413752 448 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 AC243428.1-201ENST00000421099 264 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5□□□□□ -1.61
SSU72Q9NP77 CALM2P2-201ENST00000428512 440 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 RPS27P18-201ENST00000431701 247 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5□□□□□ -1.61
SSU72Q9NP77 AC239809.1-201ENST00000450470 217 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5□□□□□ -1.61
SSU72Q9NP77 RNU7-167P-201ENST00000459160 62 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 MRPS35P2-201ENST00000508242 191 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC5□□□□□ -1.61
SSU72Q9NP77 RNU2-69P-201ENST00000516061 100 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 RNA5SP384-201ENST00000516615 116 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 RNU6-1332P-201ENST00000516666 104 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5□□□□□ -1.61
SSU72Q9NP77 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSU72Q9NP77 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5□□□□□ -1.61
SSU72Q9NP77 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5□□□□□ -1.61
SSU72Q9NP77 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5□□□□□ -1.61
SSU72Q9NP77 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5□□□□□ -1.61
SSU72Q9NP77 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
SSU72Q9NP77 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSU72Q9NP77 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SSU72Q9NP77 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5□□□□□ -1.61
SSU72Q9NP77 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5□□□□□ -1.61
SSU72Q9NP77 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSU72Q9NP77 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSU72Q9NP77 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSU72Q9NP77 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SSU72Q9NP77 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSU72Q9NP77 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms