Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC092427.1-202ENST00000430569 476 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 RPS23P3-201ENST00000470993 430 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 RPS26P21-201ENST00000475397 348 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC107222.1-201ENST00000510899 637 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 SCARNA16.3-201ENST00000516595 184 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 SETP2-201ENST00000553886 926 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 AC073387.2-201ENST00000604797 784 ntBASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.94□□□□□ -2.1
KIAA1549Q9HCM3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC090740.1-201ENST00000623193 2262 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 FAM133CP-201ENST00000332869 704 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 RNU2-2P-201ENST00000410396 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 MTCO3P4-201ENST00000419236 787 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC005517.2-201ENST00000424673 553 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 RBM43P1-201ENST00000476891 1081 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC022616.2-201ENST00000523185 300 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 SNRPGP18-201ENST00000553000 214 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC090751.1-201ENST00000566966 267 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 GLUD1P4-201ENST00000590914 418 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC020895.1-201ENST00000595362 272 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 VN1R78P-201ENST00000597393 564 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC098826.3-201ENST00000603823 466 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC103710.1-201ENST00000610003 901 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.15-201ENST00000611544 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.16-201ENST00000613119 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.12-201ENST00000613778 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.20-201ENST00000613956 192 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.9-201ENST00000615427 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.11-201ENST00000616345 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.2-201ENST00000616535 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.3-201ENST00000617785 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.19-201ENST00000618602 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 RNU2-1-201ENST00000618664 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.6-201ENST00000619225 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.5-201ENST00000619465 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 U2.10-201ENST00000620268 191 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AL121594.5-201ENST00000631724 573 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 CU459211.1-201ENST00000635667 749 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 AC005336.3-201ENST00000623833 2679 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KIAA1549Q9HCM3 RNU6-98P-201ENST00000384173 107 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 ANAPC10P1-201ENST00000395991 556 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AL591034.1-201ENST00000407447 340 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 HMGB3P12-201ENST00000438745 556 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 RPS26P56-201ENST00000444468 240 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC023424.2-201ENST00000493479 777 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC018630.1-201ENST00000541376 925 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AL109653.1-201ENST00000603091 248 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC010378.1-201ENST00000619270 362 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC026634.1-201ENST00000634369 198 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC244517.1-201ENST00000606030 2086 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC091564.4-201ENST00000533934 2194 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 RNU6-1077P-201ENST00000410506 102 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC092638.1-201ENST00000411966 1275 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 ARL5AP3-201ENST00000439327 386 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC008494.2-201ENST00000514544 370 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AP000889.2-201ENST00000532684 490 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC060766.3-201ENST00000591442 263 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 AL136981.2-201ENST00000617319 734 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KIAA1549Q9HCM3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms