Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 SNORD116-29-201ENST00000384516 83 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AL161631.1-201ENST00000417933 486 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 E2F6P2-201ENST00000420708 748 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 HSPE1P1-201ENST00000421494 318 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 BEND7P1-201ENST00000422058 457 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC104333.2-201ENST00000422630 192 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 OR4K11P-201ENST00000431829 904 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 IPO7P1-201ENST00000442031 636 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AL591473.1-201ENST00000464297 313 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 RPS4XP10-201ENST00000465034 731 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 RPL36AP41-201ENST00000493820 306 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC004062.1-201ENST00000509926 645 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 MTCO3P44-201ENST00000510977 541 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC114797.1-201ENST00000514003 728 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC105417.1-201ENST00000514691 285 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.665-201ENST00000516177 98 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 RNA5SP360-201ENST00000516555 118 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AP001781.1-201ENST00000530977 207 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 OR4K8P-201ENST00000578842 1048 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 POLR3GP2-201ENST00000588366 668 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC010680.4-201ENST00000605334 543 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AC099669.2-201ENST00000616549 437 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 OR51H2P-202ENST00000641424 3046 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 LINC01109-201ENST00000603837 3081 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 AP001273.1-201ENST00000624493 3152 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 MTND5P33-201ENST00000571250 1450 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF38Q9H0F5 MTCO1P12-201ENST00000414273 1543 ntBASIC4.87□□□□□ -1.63
RNF38Q9H0F5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC097714.1-201ENST00000511272 1647 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 ZFRP1-201ENST00000457579 2970 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC008079.2-201ENST00000623543 20396 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.367-201ENST00000365544 101 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.373-201ENST00000365600 103 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 MIR129-1-201ENST00000384972 72 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 MT-TC-201ENST00000387405 66 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AL356057.3-201ENST00000402607 340 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 RNU4-26P-201ENST00000410270 107 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AL732292.1-201ENST00000426692 226 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 PSMA6P3-201ENST00000428242 164 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 C4BPAP2-201ENST00000428434 478 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 MRPL48P1-201ENST00000445390 636 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 DDX3P2-201ENST00000446138 111 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 BTF3P6-201ENST00000448054 499 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 HMGB1P15-201ENST00000453854 435 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 VN1R17P-201ENST00000472048 1090 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC022795.1-201ENST00000473808 480 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 RPL21P99-201ENST00000480369 423 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 HSPD1P15-201ENST00000505573 1122 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 TXNP6-201ENST00000510190 310 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 Y_RNA.718-201ENST00000517110 102 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 RPL7P20-201ENST00000520308 745 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 OR5B10P-201ENST00000532869 642 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC053481.3-201ENST00000577881 843 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC100830.2-201ENST00000581636 240 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AL080274.1-201ENST00000605565 220 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 OR6R2P-201ENST00000609216 300 ntBASIC4.86□□□□□ -1.63
RNF38Q9H0F5 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms